Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C09
         (159 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   0.80 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   2.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   2.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   2.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    18   9.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    18   9.8  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      18   9.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    18   9.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 0.80
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 8   AFTHYPYLLYLGDQCPPVH*IRGTEI 85
           +F  +  L+Y    C P H IR T++
Sbjct: 508 SFHQWGILVYEPSACRPRHEIRSTDV 533


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 4   RGIYALPLSIVLRGSMSPSTLDKGHG 81
           R +YA+ +S  L G +SP+ +    G
Sbjct: 94  RQVYAVVVSHPLTGDLSPAAVSYTSG 119


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 153 CLYYNGYKPENFQKNKILGPLIF 85
           CLY N Y P +   ++ L P+IF
Sbjct: 105 CLYLNVYVPADRTPSQSL-PVIF 126


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 153 CLYYNGYKPENFQKNKILGPLIF 85
           CLY N Y P +   ++ L P+IF
Sbjct: 105 CLYLNVYVPADRTPSQSL-PVIF 126


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 61  TLDKGHGDKY 90
           TLD+ H DKY
Sbjct: 209 TLDRFHNDKY 218


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2
          protein.
          Length = 162

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 55 PSTLDKGHGDK 87
          P TL  GHG+K
Sbjct: 32 PGTLWCGHGNK 42


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 55 PSTLDKGHGDK 87
          P TL  GHG+K
Sbjct: 37 PGTLWCGHGNK 47


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 88  IYLRAPYLVY 59
           +Y ++PYL+Y
Sbjct: 82  LYQQSPYLMY 91


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 55 PSTLDKGHGDK 87
          P TL  GHG+K
Sbjct: 37 PGTLWCGHGNK 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,587
Number of Sequences: 438
Number of extensions: 832
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 32
effective length of database: 132,327
effective search space used:  2646540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)