Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C08
         (316 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7JYG3 Cluster: FHA domain protein; n=9; Vibrio|Rep: FH...    32   2.2  
UniRef50_A2DPZ0 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_A0D1G5 Cluster: Chromosome undetermined scaffold_34, wh...    31   5.0  
UniRef50_A6RKV7 Cluster: Predicted protein; n=1; Botryotinia fuc...    31   5.0  
UniRef50_Q5KCY0 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_A7JYG3 Cluster: FHA domain protein; n=9; Vibrio|Rep: FHA
           domain protein - Vibrio sp. Ex25
          Length = 497

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 160 LCVSNKNVRVNQPDLLMLEKKSMESNKNICSFSFHLTHYELLEPSSLTRLTL 5
           LC+ N    +++ + L  E+ + ESN NI      L    LL P+ L    L
Sbjct: 363 LCIDNLQKELHEVESLKEEQSTSESNSNIAELMLTLNSQHLLAPNELVEQML 414


>UniRef50_A2DPZ0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 766

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 145 KNVRVNQPDLLMLEKKSMESNKNICSFSF 59
           KN+R+++ D+ +L    +  N N+C F F
Sbjct: 357 KNIRISESDMSLLRTLKITGNDNLCEFDF 385


>UniRef50_A0D1G5 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_34,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 940

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -1

Query: 193 QETTVLKILILLCVSNKNVRVNQPDLLMLEKKSMESNKNICSFSFHLT--HY 44
           Q  ++ K  ++LCVS+K   +  P L  LE  S + N N+  F FH+T  HY
Sbjct: 846 QYNSLDKFKLILCVSSKTQILGYPILQDLEYLSGQYNLNL--FEFHITKLHY 895


>UniRef50_A6RKV7 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 670

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +1

Query: 133 RAHSYLKRIVRLRFSIP----SSLDCRIISLSM*CRKRFTGHSPALGPIPELGGSYTRRQ 300
           RA S +KR++ LR + P     S D    S S  C++   G    LG + +LG    RR 
Sbjct: 90  RAVSGMKRLLPLRLATPPLSEDSEDSDSHSTSTSCKRSTFGQLERLGDLSDLGNMSQRRL 149

Query: 301 HHT 309
           H T
Sbjct: 150 HGT 152


>UniRef50_Q5KCY0 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 421

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = -3

Query: 281 PPNSGIGPSA--GECPVNRFRHYIDK--LIMRQSRDDGIEN 171
           PP SG+GP+A   E  V  F   +D   L MR++  DG +N
Sbjct: 29  PPESGVGPAAPKKEVTVEDFEKLLDSTPLFMRETPKDGDDN 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,454,360
Number of Sequences: 1657284
Number of extensions: 4127286
Number of successful extensions: 10955
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10955
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)