Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C08
         (316 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX248244-12|CAM26096.1|  217|Homo sapiens chromosome 6 open read...    29   3.8  
AL844216-8|CAM45769.1|  217|Homo sapiens chromosome 6 open readi...    29   3.8  
AL670886-46|CAI17818.2|  217|Homo sapiens chromosome 6 open read...    29   3.8  
AL662899-29|CAI18412.2|  217|Homo sapiens chromosome 6 open read...    29   3.8  
AJ292261-1|CAC83498.1|  217|Homo sapiens G6b-C protein protein.        29   3.8  

>BX248244-12|CAM26096.1|  217|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 263 GPSAGECPVNRFRHYIDKL 207
           GP+ G CP NRF H +D L
Sbjct: 133 GPTHGACPRNRFDHSLDLL 151


>AL844216-8|CAM45769.1|  217|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 263 GPSAGECPVNRFRHYIDKL 207
           GP+ G CP NRF H +D L
Sbjct: 133 GPTHGACPRNRFDHSLDLL 151


>AL670886-46|CAI17818.2|  217|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 263 GPSAGECPVNRFRHYIDKL 207
           GP+ G CP NRF H +D L
Sbjct: 133 GPTHGACPRNRFDHSLDLL 151


>AL662899-29|CAI18412.2|  217|Homo sapiens chromosome 6 open reading
           frame 25 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 263 GPSAGECPVNRFRHYIDKL 207
           GP+ G CP NRF H +D L
Sbjct: 133 GPTHGACPRNRFDHSLDLL 151


>AJ292261-1|CAC83498.1|  217|Homo sapiens G6b-C protein protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 263 GPSAGECPVNRFRHYIDKL 207
           GP+ G CP NRF H +D L
Sbjct: 133 GPTHGACPRNRFDHSLDLL 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,138,161
Number of Sequences: 237096
Number of extensions: 626916
Number of successful extensions: 1338
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)