Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C08
         (316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    27   6.7  
AF395904-1|AAL59598.1|  692|Drosophila melanogaster roughened ey...    27   6.7  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    27   6.7  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    27   6.7  
AE014297-594|AAS65102.1|  692|Drosophila melanogaster CG32466-PB...    27   6.7  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p
           protein.
          Length = 1688

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 SVGNGLRGILRHLVQYPNWEDPIHAAS 301
           S+GN +R +L  L+  PN  D  H+++
Sbjct: 494 SIGNSIRILLVRLISLPNINDQTHSSN 520


>AF395904-1|AAL59598.1|  692|Drosophila melanogaster roughened eye
           protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 244 HSPALGPIPELGGSYTRRQHHTV 312
           +SP +G IP  GG Y+   H ++
Sbjct: 20  NSPLIGEIPPAGGDYSHAVHRSI 42


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
           isoform A protein.
          Length = 1537

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 SVGNGLRGILRHLVQYPNWEDPIHAAS 301
           S+GN +R +L  L+  PN  D  H+++
Sbjct: 343 SIGNSIRILLVRLISLPNINDQTHSSN 369


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
           isoform B protein.
          Length = 1688

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 SVGNGLRGILRHLVQYPNWEDPIHAAS 301
           S+GN +R +L  L+  PN  D  H+++
Sbjct: 494 SIGNSIRILLVRLISLPNINDQTHSSN 520


>AE014297-594|AAS65102.1|  692|Drosophila melanogaster CG32466-PB,
           isoform B protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 244 HSPALGPIPELGGSYTRRQHHTV 312
           +SP +G IP  GG Y+   H ++
Sbjct: 20  NSPLIGEIPPAGGDYSHAVHRSI 42


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,429,795
Number of Sequences: 53049
Number of extensions: 194533
Number of successful extensions: 545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)