Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C07
         (285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   0.84 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   3.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       20   4.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   4.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   4.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   4.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    20   4.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   4.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    19   7.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    19   7.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    19   7.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    19   7.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    19   7.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    19   7.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    19   7.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           19   7.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    19   7.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    19   7.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    19   7.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 0.84
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 107 CFCANGDGRARYRPCCGPYVGCGRPSCRINSRPGD 3
           CFC NG+ +     C  P V C   + ++   PG+
Sbjct: 696 CFCENGNNKCFTMEC--PQVTC-PDNMKLEKVPGE 727


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 162 QPLEEIGNIRSQSKRADSAVYSR 230
           +PL +I NIR   KR   A  +R
Sbjct: 275 KPLTQIRNIRGPRKRLRFAYVTR 297


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  DRNRHKDRNTVYTVHDHHH 94
           ++ +  ++ T  ++H HHH
Sbjct: 91  EKQQKIEQQTHSSIHQHHH 109


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 125 QTQHRKSQSLDVTATRRDR 181
           ++ H + +++D+T + RDR
Sbjct: 49  ESLHYEGRAVDITTSDRDR 67


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -3

Query: 211 SALFDWLRMLPISSSGCYVERLGLTVLRLPWSFRCASVRMVMVV 80
           ++L+ W  +  ++ SG        T+++   SFR  S   +MVV
Sbjct: 47  TSLYIWFILTQMTFSGV----TSPTIMKFVLSFRTGSFTFLMVV 86


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -3

Query: 211 SALFDWLRMLPISSSGCYVERLGLTVLRLPWSFRCASVRMVMVV 80
           ++L+ W  +  ++ SG        T+++   SFR  S   +MVV
Sbjct: 47  TSLYIWFILTQMTFSGV----TSPTIMKFVLSFRTGSFTFLMVV 86


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 115 RTMADAAP*VPISRRNS 165
           RTMA+AAP    S R+S
Sbjct: 344 RTMANAAPGNSASNRHS 360


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  DRNRHKDRNTVYTVHDHHH 94
           ++ +  ++ T  ++H HHH
Sbjct: 242 EKQQKIEQQTHSSIHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = +2

Query: 38  DRNRHKDRNTVYTVHDHHH 94
           ++ +  ++ T  ++H HHH
Sbjct: 301 EKQQKIEQQTHSSIHQHHH 319


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 65  CCGPYVGCGRPSCRINS 15
           C GP + CG   C + +
Sbjct: 56  CFGPSICCGPFGCLVGT 72


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 83   DHHHSHRSTTEG 118
            DHHH    T EG
Sbjct: 1174 DHHHLGAVTEEG 1185


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 83   DHHHSHRSTTEG 118
            DHHH    T EG
Sbjct: 1174 DHHHLGAVTEEG 1185


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 83   DHHHSHRSTTEG 118
            DHHH    T EG
Sbjct: 1174 DHHHLGAVTEEG 1185


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 83   DHHHSHRSTTEG 118
            DHHH    T EG
Sbjct: 1174 DHHHLGAVTEEG 1185


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 84  PLSTPSNSNATKSSGLTS 101


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 247 FRVRRIREYTAESALFDWLRMLP 179
           F+V R+ EY      FD    LP
Sbjct: 93  FKVHRLEEYYPNPDKFDPDNFLP 115


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 269 PLSTPARIPSSEDTGIYS 216
           PLSTP+   +++ +G+ S
Sbjct: 128 PLSTPSNSNATKSSGLTS 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,369
Number of Sequences: 336
Number of extensions: 1618
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)