Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C07
(285 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0608 + 30329174-30329362,30329681-30329907,30330035-303301... 32 0.062
01_03_0184 + 13560830-13562981,13563604-13564088 30 0.33
02_05_0267 - 27284781-27284957,27285082-27285126,27285858-272859... 29 0.44
08_01_0397 - 3509186-3510291,3510322-3512335 29 0.76
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 28 1.0
01_05_0392 + 21729501-21729895,21730198-21730312 28 1.0
10_08_0531 + 18576913-18578058,18578724-18578843,18578924-185789... 28 1.3
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 27 1.8
09_02_0530 + 10285844-10287217 27 1.8
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 27 1.8
02_05_0764 + 31589040-31589309,31589322-31589529,31589892-31590193 27 1.8
06_03_0144 + 17219065-17219142,17219694-17220068 27 2.3
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 27 3.1
06_03_1204 - 28385702-28385964,28387172-28387412,28387511-283876... 27 3.1
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 27 3.1
11_02_0007 + 7283080-7283918,7284526-7285764,7286317-7286376,728... 26 4.1
10_08_0315 - 16686830-16687297 26 4.1
09_02_0154 + 5055946-5058721,5058754-5058770 26 4.1
02_03_0131 - 15576422-15577021 26 4.1
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 26 4.1
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 26 5.4
02_05_0576 + 30097139-30097235,30097532-30097630,30097855-300979... 26 5.4
11_01_0404 + 3071412-3071464,3073572-3074970 25 7.1
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 25 7.1
08_02_0616 - 19357401-19357522,19357600-19357705 25 7.1
07_03_0846 - 21983581-21986055 25 7.1
07_02_0009 - 11716174-11716435,11716837-11717459,11718385-117184... 25 7.1
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 25 7.1
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 25 7.1
01_06_0066 - 26113761-26114683,26115031-26115106,26115204-261154... 25 7.1
12_02_1154 - 26540090-26540653 23 8.8
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 25 9.4
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 25 9.4
11_06_0425 - 23365108-23366028,23366182-23366340,23366445-233666... 25 9.4
10_03_0007 - 6956215-6956223,6957082-6957300,6957874-6957978,695... 25 9.4
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535... 25 9.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 25 9.4
07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423 25 9.4
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 25 9.4
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 25 9.4
05_01_0582 - 5220614-5220781,5220866-5220930,5221149-5221332 25 9.4
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 25 9.4
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 25 9.4
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 25 9.4
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 25 9.4
01_01_1048 + 8272486-8272941 25 9.4
>02_05_0608 +
30329174-30329362,30329681-30329907,30330035-30330190,
30330893-30331078,30331184-30331368,30331571-30331602
Length = 324
Score = 32.3 bits (70), Expect = 0.062
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 68 VYTVHDHHHSHRSTTEGPWQTQH---RKSQSLDVTATRRDRQHSQPVKESRFRCIF 226
V+TV HH+H G W + K + LD+ AT R + KES ++CI+
Sbjct: 46 VFTVLFPHHAHFRIVTGVWLARRLIFEKDEKLDL-ATHAGRIKIRKFKESAWKCIY 100
>01_03_0184 + 13560830-13562981,13563604-13564088
Length = 878
Score = 29.9 bits (64), Expect = 0.33
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 55 GPQHGLYRARPSPFAQKHNGRTMADA 132
GP+HG R SP Q+H GR DA
Sbjct: 833 GPRHGPRRHPVSPLPQRHTGRAGPDA 858
>02_05_0267 -
27284781-27284957,27285082-27285126,27285858-27285923,
27286043-27286114,27286225-27286350,27286563-27287217,
27287313-27287521
Length = 449
Score = 29.5 bits (63), Expect = 0.44
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 71 YTVHDHHHSHRSTTEGPWQTQHRKSQSLDVT 163
Y H HHH H+ T EG Q ++ L ++
Sbjct: 166 YGEHHHHHHHQLTKEGSCNHQQQEQHELAIS 196
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.7 bits (61), Expect = 0.76
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 38 DRNRHKDRNTVYTVHDHHHSHR-STTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESR 211
DR+R + R + + HHH HR + EGP + R+ + +DV R RQ + ++ +
Sbjct: 115 DRDRKRRRRSSH----HHHHHRDAEPEGP-ASGAREEEVVDVEEAERRRQKKKEEEQKQ 168
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -2
Query: 140 YGAASAMVLPLCF--CANGDGRARYRPCCGPYVGC 42
Y SA PL C +G G Y P CG Y GC
Sbjct: 258 YSVPSARPPPLLPPPCYSGGGGGGYTPYCGGYSGC 292
>01_05_0392 + 21729501-21729895,21730198-21730312
Length = 169
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 192 CECCLSLLVAVTSRDWDLRCCVC--HGPSVVL 103
C C + + + S DLRCC+C H P VV+
Sbjct: 18 CSVCAARIRSSRSWQPDLRCCICRAHCPFVVV 49
>10_08_0531 +
18576913-18578058,18578724-18578843,18578924-18578970,
18579588-18579630
Length = 451
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 26 GTRGDRNRHKDRNTVYTVHDHHHSHRSTTEGP 121
GTR N H + T DH S++S T+GP
Sbjct: 144 GTRRGANAHGNGRTASVSEDHVLSNQSGTDGP 175
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 27.5 bits (58), Expect = 1.8
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = -3
Query: 283 YHYIVHFQLQLVFRVRRIREYTAESALFDWLRMLPISSSGCYVERL-GLTVLRLPWSFRC 107
+H+ H QL+ R R+ E +AL L +S S RL GL L RC
Sbjct: 94 HHHHRHRQLRDELRGLRLGEREIRAALASDAEGLLLSMSPGEPTRLVGLVRDEL----RC 149
Query: 106 -ASVRMVMVVHGIDRVAVLMSVAVAPRAELIHARGI 2
A+VR ++ G A+ +VA R EL+HARG+
Sbjct: 150 RAAVRDRVLAGG----ALAAAVAARRRVELLHARGL 181
>09_02_0530 + 10285844-10287217
Length = 457
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 247 FRVRRIREYTAESALFDWLRMLPISSSGCYVERLGLT 137
F V R+ +YT A D+ R+L SS ER+G T
Sbjct: 85 FLVGRLEDYTVSPASADFRRLLAQLSSAGLFERVGPT 121
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESR 211
R R D + + D HH R + + R D RR R H +ESR
Sbjct: 5 RSSRRPRDDDDRHHRSRDDHHRRRHDADDDHRRHKRGGGGDDDDDRRRRRHHRDDEEESR 64
Query: 212 FR 217
R
Sbjct: 65 SR 66
>02_05_0764 + 31589040-31589309,31589322-31589529,31589892-31590193
Length = 259
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 143 TYGAASAMVLPLCFCANGDGRARYRPCCGP 54
TYG+A+A + C G R+ P C P
Sbjct: 203 TYGSAAAAAAAVVHCGLGPPHDRWAPACHP 232
>06_03_0144 + 17219065-17219142,17219694-17220068
Length = 150
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 167 WLLRREIGTYGAASAMVLPLCFCANGDGRARYRPCCGP 54
WLL R +GAA+ V+ A+ D R PC P
Sbjct: 62 WLLHRNATRHGAAATAVIQALMAAD-DATGRPAPCSLP 98
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 146 QSLDVTAT-RRDRQHSQPVKESRFRCIFPYP 235
+SLDV ++ +R ++HS K SR FP P
Sbjct: 211 RSLDVASSCKRQKKHSNGTKRSRTESNFPSP 241
>06_03_1204 -
28385702-28385964,28387172-28387412,28387511-28387664,
28387750-28387981,28388157-28388192,28388365-28388566,
28388661-28388848,28389420-28389505,28389526-28389597,
28389826-28389881,28390266-28390697
Length = 653
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 26 GTRGDRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHS 190
G RG+ NT VH+H + + + + R+ + L A R+ R S
Sbjct: 568 GCRGNDMNTAAMNTAADVHEHGAAAAISVSSAMEPKPRRDECLRAAAARQQRSFS 622
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 179 RQHSQPVKESRFRCIFPYPP 238
R+ P KE FRC+ P PP
Sbjct: 908 RERHCPRKEELFRCLIPAPP 927
>11_02_0007 +
7283080-7283918,7284526-7285764,7286317-7286376,
7287469-7287610
Length = 759
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 234 GYGNIQ--RNLLSLTGCECCLSLLVAVTSRDWDLRC 133
G+GN++ + L + GC C +S L+ S RC
Sbjct: 666 GFGNMESLQELGIVDGCNCSISFLITPRSTKQGARC 701
>10_08_0315 - 16686830-16687297
Length = 155
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 37 RPQPT*GPQHGLYRARPSPFAQKHNGRT 120
RP P GP G YR F + N RT
Sbjct: 28 RPAPPVGPALGFYRLNLMAFCKDFNART 55
>09_02_0154 + 5055946-5058721,5058754-5058770
Length = 930
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 100 VRMVMVVHGIDRVAVLMSVAVAPRAELIHARG 5
VR+ +V HG D + L + P E +H RG
Sbjct: 738 VRLGIVSHGEDEILDLQHLGHVPDLEWLHLRG 769
>02_03_0131 - 15576422-15577021
Length = 199
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 32 RGDRNRHKDRNTV----YTVHDHHHSHRS-TTEGPWQTQHRKSQSLDVTATRRDRQ 184
RG+R+R + R+ + H H HSHR ++ P +H++ + A D +
Sbjct: 57 RGERDRKRSRSPSADRSHRRHSHSHSHRGRSSPSPDAGRHKRRRDGSPAAAATDHK 112
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 80 HDHHHSHRSTTE 115
H HHH HRS++E
Sbjct: 1322 HHHHHDHRSSSE 1333
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRS 106
R R R K V T H HHH + S
Sbjct: 79 RAPRRRRKAMMPVRTYHHHHHHNNS 103
>02_05_0576 +
30097139-30097235,30097532-30097630,30097855-30097929,
30098242-30098328,30098553-30098627,30098940-30099026,
30099204-30099220
Length = 178
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 168 LEEIGNIRSQSKRADSAVYSRILRTRNTSWS*K 266
L+ + NI+ ++K A S + S +NT+W K
Sbjct: 104 LQNLENIKRRTKMAQSGLVSESESLKNTNWQNK 136
>11_01_0404 + 3071412-3071464,3073572-3074970
Length = 483
Score = 25.4 bits (53), Expect = 7.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQH 136
H HHH H S G + +H
Sbjct: 123 HHHHHRHHSKNHGSDEEEH 141
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 24 SARGATATDIRTATRSIPCTTITIRTEAQRKDHGRR 131
S ATAT +R A + P TT++ + R+ RR
Sbjct: 98 SHAAATATTLRAAHMAPPATTLSDALDHDRRRDARR 133
>08_02_0616 - 19357401-19357522,19357600-19357705
Length = 75
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 50 VGCGRPSCRINSRP 9
VG G PSCR++S P
Sbjct: 27 VGSGSPSCRLDSEP 40
>07_03_0846 - 21983581-21986055
Length = 824
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 146 GTYGAASAMVLPLCFCANG 90
G YG+ + VLP C C G
Sbjct: 298 GAYGSCNLNVLPFCNCIKG 316
>07_02_0009 -
11716174-11716435,11716837-11717459,11718385-11718469,
11719346-11719374
Length = 332
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRSTT 112
RG +R+ D NT YT H S STT
Sbjct: 214 RGLTDRNGDDNTDYTHSSSHRSDGSTT 240
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 25.4 bits (53), Expect = 7.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 98 ANGDGRARYRPCCGP 54
AN D + + PCCGP
Sbjct: 920 ANADEQMYFHPCCGP 934
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 84 TITIRTEAQRKDHGRRSTVSPNLST*QPLEEIGNIRSQSKRADSAV 221
TIT + EA + DH S SP ++ G + S++ ++D+ V
Sbjct: 140 TITHQIEAPQADHVEDSVSSPKYVKPAVAKQNGEVVSRATKSDAPV 185
>01_06_0066 -
26113761-26114683,26115031-26115106,26115204-26115401,
26115829-26116014,26116292-26116447,26116486-26116731,
26116832-26117149,26117235-26117292,26117472-26117837,
26119300-26119604
Length = 943
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 89 DGRARYRPCCGPYVGCG 39
DGR+R P CGP+ G G
Sbjct: 35 DGRSRMMPACGPW-GAG 50
>12_02_1154 - 26540090-26540653
Length = 187
Score = 23.0 bits (47), Expect(2) = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 77 VHDHHHSHR 103
VH HHH HR
Sbjct: 13 VHHHHHHHR 21
Score = 20.6 bits (41), Expect(2) = 8.8
Identities = 6/14 (42%), Positives = 7/14 (50%)
Frame = +2
Query: 80 HDHHHSHRSTTEGP 121
H HHH R+ P
Sbjct: 15 HHHHHHRRALAASP 28
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 29 TRGDRNRHKDRNTVYTVHDHHHSHRSTTEGPW 124
T DRN+ ++RN + + H + PW
Sbjct: 351 TNSDRNQDENRNPNLQTTSYRYFHGDAKDHPW 382
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 38 DRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQS 151
D R +DR+ D H HRS + P + + R+S+S
Sbjct: 132 DSERRRDRD-----RDGHRRHRSRSRSPSKGRDRRSRS 164
>11_06_0425 -
23365108-23366028,23366182-23366340,23366445-23366640,
23366995-23367527,23367817-23368272,23368507-23368758,
23368890-23369007,23369836-23369993
Length = 930
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -1
Query: 138 RCCVCHGPSVVLL-CEW*WSC 79
+ V GP VV L CEW W C
Sbjct: 67 QAAVVDGPLVVPLDCEWIWHC 87
>10_03_0007 -
6956215-6956223,6957082-6957300,6957874-6957978,
6958062-6958175,6958342-6958467,6958583-6958697,
6958791-6958867,6958956-6959179,6959848-6959953,
6960065-6960163,6960282-6960467,6960611-6960613
Length = 460
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +2
Query: 41 RNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESRFR 217
R R + + H HHH R P + + ++ A R S+ +ES++R
Sbjct: 13 RRREQQQQGREQRHHHHHRRRPLLLQPRDERCVSCTTFNILAPIYKRMDSENCRESQYR 71
>08_01_0609 +
5345761-5345862,5346808-5346871,5346958-5350191,
5350375-5350589,5351123-5351393,5351986-5352161,
5352287-5352394,5352821-5352930,5354291-5354393,
5354658-5354828,5354952-5355080,5355322-5355504,
5355612-5355701,5355823-5355934,5356100-5356227,
5357769-5357825,5357872-5357923,5358318-5358393,
5358860-5358950,5359046-5359224,5359563-5359681,
5359783-5359880
Length = 1955
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 141 SPNLST*QPLEEIGNIRSQSKRADSAVYSRILRTRNTSW 257
+P ++ ++E +I S + D+ Y+R+LR +T W
Sbjct: 79 APRIAAESSIQEREHINSDEETFDT--YNRLLRNESTEW 115
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 25.0 bits (52), Expect = 9.4
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 8 PGVN*FGTRGDRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQH 187
PG +G+R H N H H HSHR + + D ++ RD +
Sbjct: 28 PGGEAMPDKGERGHHTTSNNH---HSHSHSHRK-HHAELEEGELLNGEAD-NSSSRDLER 82
Query: 188 SQPVKESR 211
S P K+ R
Sbjct: 83 SMPPKKWR 90
>07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423
Length = 266
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRS 106
R +R + KD+ + H HHH H+S
Sbjct: 240 RKERRKKKDKKK--SKHRHHHHHKS 262
>06_01_1096 -
8988463-8989167,8989335-8989361,8989560-8989648,
8989830-8990039,8990877-8991047,8991595-8991777,
8991886-8991969,8992067-8992178
Length = 526
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESRF 214
H +HH + PW Q + D T D + + P K F
Sbjct: 363 HQYHHHLQQQRANPWPVQESYAIPHDETPPPLDMRAATPRKNYAF 407
>05_03_0468 +
14376926-14377183,14377534-14377710,14377802-14377867,
14378009-14378134,14378499-14378678,14379015-14379179,
14380185-14380538
Length = 441
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 83 DHHHSHRSTTEGPWQTQHRK--SQSLDVTATRRD 178
DHHH H + + GP +Q++ +A RD
Sbjct: 17 DHHHHHHTPSVGPSSPPQDSLAAQAMRASAAHRD 50
>05_01_0582 - 5220614-5220781,5220866-5220930,5221149-5221332
Length = 138
Score = 25.0 bits (52), Expect = 9.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = -2
Query: 284 LSLYRPLSTPARIPSSEDTGIYSGICSL*LAANVAYLF*WLLRREIGTYGAASAMVLPLC 105
L+++ ++PA PSS S C+L AA + + T A VL +
Sbjct: 4 LAVHAMAASPATFPSSHHHAAVSSYCALPAAAAFSRSRSRVAAAAAATLSAPLTPVLEV- 62
Query: 104 FCANGDGRAR 75
+C GD + +
Sbjct: 63 YCGRGDKKTK 72
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/48 (22%), Positives = 19/48 (39%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESRFRCI 223
H HHH + Q Q ++ D ++ +D S K S + +
Sbjct: 75 HPHHHQQQQQQYQRQQQQQQQEDHSDAASSVKDSSSSSSNKSSSLQVV 122
>02_05_0490 +
29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = -2
Query: 167 WLLRREIGTYGAASAMVLPLCFCANGDGRARYRPCCGPYVGCGRP 33
WLL+R YGAA+ V+ A+ A C P
Sbjct: 265 WLLQRNATRYGAAATAVIQALMAADEASAAGVAAAADGPAACSLP 309
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQS-LDVTATRRDRQ 184
R D ++T Y+ HHS ++E P +H + S +D RR ++
Sbjct: 229 RNDVLSPSSQDTGYSSPSIHHSRNVSSENPPSHRHPNATSQIDFNGVRRSQR 280
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 1 GSPGRELIRHEGRPQPT*GPQHGLYRARPSPFAQ--KHNGRTMA 126
G+ ++++ E PT GP R +P+ + KHNG A
Sbjct: 572 GNAQKDVVSTEKHKNPTGGPHQNFGRPQPADGKKLGKHNGHRSA 615
>01_01_1048 + 8272486-8272941
Length = 151
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 116 LPLCFCANGDGRARYRPCCGPYVGCGRPSCRINSRPGD 3
L LC CA G G A CC P P R+++ D
Sbjct: 5 LALC-CARGRGAAAGAYCCRPPGDQAVPPLRVDAAAAD 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,103,041
Number of Sequences: 37544
Number of extensions: 192646
Number of successful extensions: 786
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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