Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C07
(285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 30 0.23
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 30 0.23
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 30 0.23
Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical pr... 27 0.37
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 0.71
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 28 1.2
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 28 1.2
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 2.2
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 2.9
AL117193-19|CAB54988.1| 108|Caenorhabditis elegans Hypothetical... 27 2.9
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 26 3.3
Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical pr... 26 3.8
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 26 3.8
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 26 3.8
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 26 3.8
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 26 5.0
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 26 5.0
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 26 5.0
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 25 6.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 25 6.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 25 6.6
U41028-5|AAA82358.1| 185|Caenorhabditis elegans Hypothetical pr... 25 6.6
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 25 6.6
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 25 6.6
AF025457-13|AAY55850.1| 67|Caenorhabditis elegans Hypothetical... 25 6.6
AF025450-3|AAB70932.1| 331|Caenorhabditis elegans Hypothetical ... 25 6.6
AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical... 25 6.6
AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical... 25 6.6
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 25 6.6
Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical pr... 25 8.7
U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical pr... 25 8.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 8.7
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 25 8.7
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVT-ATRRDRQHSQPVKESRFRCIF 226
H HHHSH + P H T A+ + QPV +S+++ +F
Sbjct: 679 HHHHHSHHHASSLPPSGGHAPPPPPPPTQASSTSHNNHQPVPQSQYQSVF 728
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 30.3 bits (65), Expect = 0.23
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 199 DWLRMLPISSSGCYVERLGLTVLRLPWSFRCASVRMVMVVH 77
DW+RM+ IS+ G L WSF S ++V+ H
Sbjct: 234 DWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDH 274
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 30.3 bits (65), Expect = 0.23
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 194 PVKESRFRCIFPYPPNSEYELELKVDDIV 280
P +R ++PY P E EL+L +DI+
Sbjct: 413 PKGSEMYRAVYPYQPQKEDELQLYTNDII 441
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 30.3 bits (65), Expect = 0.23
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 199 DWLRMLPISSSGCYVERLGLTVLRLPWSFRCASVRMVMVVH 77
DW+RM+ IS+ G L WSF S ++V+ H
Sbjct: 234 DWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDH 274
>Z71265-2|CAA95834.2| 128|Caenorhabditis elegans Hypothetical
protein M05B5.2 protein.
Length = 128
Score = 27.1 bits (57), Expect(2) = 0.37
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -2
Query: 110 LCFCANGDGRARYRPCCG-PYVGCGRPSC 27
L FC Y CC PY+G +PSC
Sbjct: 53 LAFCPQPTDWDNYNWCCTFPYMGSWKPSC 81
Score = 21.4 bits (43), Expect(2) = 0.37
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 134 AASAMVLPLCFCANGDG 84
A +A++ LC+ ANG G
Sbjct: 9 AFAAVLCTLCYYANGQG 25
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 0.71
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 41 RNRHKDRNT--VYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRD-RQHSQPVKESR 211
R+R DR + HHHSHRS+ + HR + D R+ R+H + ++ R
Sbjct: 264 RSRSTDRGADRKRSTEQHHHSHRSSRD------HRDHRHRDHRGEHREHREHKEHRRDDR 317
Query: 212 FR 217
R
Sbjct: 318 HR 319
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 DRNRHK-DRNTVYTVHDHHHSHRSTTEGPWQT 130
D NRH+ ++ ++ H HHH H TT P T
Sbjct: 177 DPNRHRYGQDRIH--HQHHHHHHHTTTTPSTT 206
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 86 HHHSHRSTTEGPWQTQHRKSQ 148
HHH H S+T P T R+S+
Sbjct: 323 HHHHHYSSTVRPTTTTTRESE 343
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 DRNRHK-DRNTVYTVHDHHHSHRSTTEGPWQT 130
D NRH+ ++ ++ H HHH H TT P T
Sbjct: 177 DPNRHRYGQDRIH--HQHHHHHHHTTTTPSTT 206
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 86 HHHSHRSTTEGPWQTQHRKSQ 148
HHH H S+T P T R+S+
Sbjct: 323 HHHHHYSSTVRPTTTTTRESE 343
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQ 148
H HHH H+S E P + + K +
Sbjct: 1389 HHHHHHHKSKEEKPKEAKDHKER 1411
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTAT----RRDRQHSQPVKESRFRCIFPYP 235
H HHHS R TT G + ++ +++ + T R R + P +R P P
Sbjct: 922 HHHHHSQRPTTPGATRARNYIARATAPSPTPYSYDRARAYVPPALPPGYRLADPIP 977
>AL117193-19|CAB54988.1| 108|Caenorhabditis elegans Hypothetical
protein Y105C5A.9a protein.
Length = 108
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 74 TVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKE 205
T+ D H ++ G +T+ ++ + ++RDR H +PV +
Sbjct: 46 TMSDKKHQCQTKCSGEPETRKSHTEEQKDSPSKRDRYHGRPVAQ 89
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQ 184
HDHHH H + T + K + +T + RQ
Sbjct: 363 HDHHHHHHESHVTHTFTSNVKQSRSNTASTYQSRQ 397
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 59 RNTVYTVHDHHHSH 100
++T+ + H HHH H
Sbjct: 1223 KSTIQSGHHHHHHH 1236
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +2
Query: 80 HDHHHSHRSTTEGP 121
H HHH H + + P
Sbjct: 1232 HHHHHDHENRNDVP 1245
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQ 184
HDHHH H + T + K + +T + RQ
Sbjct: 363 HDHHHHHHESHVTHTFTSNVKQSRSNTASTYQSRQ 397
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 59 RNTVYTVHDHHHSH 100
++T+ + H HHH H
Sbjct: 542 KSTIQSGHHHHHHH 555
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +2
Query: 80 HDHHHSHRSTTEGP 121
H HHH H + + P
Sbjct: 551 HHHHHDHENRNDVP 564
>Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical
protein F31C3.4 protein.
Length = 318
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +2
Query: 53 KDRNTV----YTVHDHHHSHRSTTEGPWQTQ 133
KDRN Y +H H+H H+ + +G Q +
Sbjct: 125 KDRNVFGHVGYHIHSHNHEHQRSEDGESQEE 155
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 98 HRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKES 208
+RS +GP Q+ Q +++ ++D QP++ES
Sbjct: 859 NRSMQQGPHNPQNIPDQMMNMQQMQQDPMSQQPLQES 895
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQH 187
H HHH S++ P Q + L T + +RQ+
Sbjct: 383 HHHHHPRVSSSSDPQQRHQSQQHYLAQTVSNPNRQN 418
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQH 187
H HHH S++ P Q + L T + +RQ+
Sbjct: 383 HHHHHPRVSSSSDPQQRHQSQQHYLAQTVSNPNRQN 418
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQ 184
HDHHH H + T + K + +T + RQ
Sbjct: 363 HDHHHHHHESHVTHTFTSNVKQSRSNTASTYQSRQ 397
>Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical
protein D1046.2 protein.
Length = 403
Score = 25.8 bits (54), Expect = 5.0
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = +2
Query: 92 HSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESRFRCIF------PYPPNSEYE 253
H H + TE Q + K + +D R R H+Q R + I P PN E
Sbjct: 287 HEHPTETEIARQMRIEKYREIDALQVRESRMHNQHHMNVRPKQIIVDQYGHPTHPNDEMM 346
Query: 254 LELKVDDIVI 283
+ + V + V+
Sbjct: 347 ILMPVGEEVV 356
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -2
Query: 281 SLYRPLSTPARIPSSEDTGIYSG 213
+++ P ST +R+P++ +T ++SG
Sbjct: 520 TVFLPSSTASRVPTTVNTAVFSG 542
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -2
Query: 281 SLYRPLSTPARIPSSEDTGIYSG 213
+++ P ST +R+P++ +T ++SG
Sbjct: 520 TVFLPSSTASRVPTTVNTAVFSG 542
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical protein
ZK430.5 protein.
Length = 1276
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 109 CASVRMVMVVHGIDRVAVLMSVAVAPRAELI 17
C SVR + HG D +V+ A+A L+
Sbjct: 1063 CESVRTIPQAHGFDGTSVIQDYAMAKCPSLV 1093
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 274 IVHFQLQLVFRVRRIREYTAESALFDWLRMLPISS 170
++ F L LVF + +YT ++A + R++PI S
Sbjct: 203 LIFFGLPLVFLHLSLGQYTGQAANTAFQRLMPIGS 237
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 5 PPGVN*FGTRGDRNRHKDRNTVYTVHDHHHSHR 103
PP N FG RH H HHH H+
Sbjct: 24 PPYYNSFGIAEPDPRHNLYAPTAPPHHHHHHHQ 56
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 77 VHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKES 208
V + HR E +Q + +KSQ+L +R + S+ +S
Sbjct: 472 VEEELMKHRKDAEDEYQKEEQKSQTLQAETKKRVARRSKSKSKS 515
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 77 VHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKES 208
V + HR E +Q + +KSQ+L +R + S+ +S
Sbjct: 472 VEEELMKHRKDAEDEYQKEEQKSQTLQAETKKRVARRSKSKSKS 515
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 77 VHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKES 208
V + HR E +Q + +KSQ+L +R + S+ +S
Sbjct: 472 VEEELMKHRKDAEDEYQKEEQKSQTLQAETKKRVARRSKSKSKS 515
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 77 VHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKES 208
V + HR E +Q + +KSQ+L +R + S+ +S
Sbjct: 472 VEEELMKHRKDAEDEYQKEEQKSQTLQAETKKRVARRSKSKSKS 515
>Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical
protein F33H1.3 protein.
Length = 359
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQH 187
H HHH H S+ P Q+ +++ +A + +R +
Sbjct: 249 HHHHHPHASSHYNPMGFQNHHEEAVISSAPQINRSN 284
>U41028-5|AAA82358.1| 185|Caenorhabditis elegans Hypothetical
protein C25G6.1 protein.
Length = 185
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 65 CCGPYVGCGRPSCR 24
CC P +G RPSCR
Sbjct: 137 CCRPVLGRCRPSCR 150
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 140 KSQSLDVTATRRDRQHSQPVKESRF---RCIFPYPPNSEYELELKVDDIVI 283
KS+ A+R+DR+ +PVK+ + + IF +P + +Y E + V+
Sbjct: 256 KSEESTTKASRKDRKSLKPVKKPKTTTQKSIF-FPRDRDYPPEFYTEPYVV 305
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 140 KSQSLDVTATRRDRQHSQPVKESRF---RCIFPYPPNSEYELELKVDDIVI 283
KS+ A+R+DR+ +PVK+ + + IF +P + +Y E + V+
Sbjct: 256 KSEESTTKASRKDRKSLKPVKKPKTTTQKSIF-FPRDRDYPPEFYTEPYVV 305
>AF025457-13|AAY55850.1| 67|Caenorhabditis elegans Hypothetical
protein C08E3.15 protein.
Length = 67
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 83 DHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKE 205
D H ++ G +T+ ++ + ++RDR H +PV +
Sbjct: 3 DKKHQFQTKCSGEPETRKSHTEEQKDSPSKRDRYHGRPVAQ 43
>AF025450-3|AAB70932.1| 331|Caenorhabditis elegans Hypothetical
protein C41H7.4 protein.
Length = 331
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 128 TQHRKSQSLDVTATRRDRQHSQPVKESRFRCIFPYPPNS 244
+++RKS S+D T R QH + E R YP S
Sbjct: 244 SRNRKSSSIDHTEVDRSAQH---IAEQAKRLFLQYPEKS 279
>AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical
protein Y95B8A.12a protein.
Length = 621
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 231 YGNI-QRNLLSLTGCECCLSLLVAVTSRDWD 142
+GN+ Q +S T C+ LSLL V +WD
Sbjct: 234 FGNLDQLCRISRTFCQSFLSLLSTVDKENWD 264
>AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical
protein Y95B8A.12b protein.
Length = 613
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 231 YGNI-QRNLLSLTGCECCLSLLVAVTSRDWD 142
+GN+ Q +S T C+ LSLL V +WD
Sbjct: 226 FGNLDQLCRISRTFCQSFLSLLSTVDKENWD 256
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 25.4 bits (53), Expect = 6.6
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +2
Query: 32 RGDRNRHKDRNTVYTVHDHHHSHRSTTEGPWQTQHRKSQSLDVTATRRDRQHSQPVKESR 211
+GD N D++ V HD +TE P + S D+ + + P+KE
Sbjct: 328 KGDANDRTDKDCVTHPHD-----LQSTEEPTTSDSNSQVSEDIPPPKNKESGTPPLKEKT 382
Query: 212 FRCIFPYPPNSEYELE 259
I P E E++
Sbjct: 383 PEPIPEEPKKVEEEVK 398
>Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical
protein F28G4.1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 256 QLVFRVRRIREYTAESALFDWLRMLPI 176
Q V VR + EY E L WLR+ P+
Sbjct: 210 QYVESVRLLSEYAFEWILRPWLRLKPL 236
>Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical
protein T19C4.5 protein.
Length = 364
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 80 HDHHHSHRSTTEGPWQTQHR 139
H H+H HRSTT T+ +
Sbjct: 341 HSHNHHHRSTTSSSRFTEQQ 360
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 134 HRKSQSLDVTATRRD--RQHSQPVKESRFRCIFPYPPNSEYELE 259
H+ +S++ +R+ R S P +E ++P P N+E E E
Sbjct: 483 HKCRRSINDIERKREIVRLGSDPKEELELFAVYPQPTNTEAETE 526
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 134 HRKSQSLDVTATRRD--RQHSQPVKESRFRCIFPYPPNSEYELE 259
H+ +S++ +R+ R S P +E ++P P N+E E E
Sbjct: 480 HKCRRSINDIERKREIVRLGSDPKEELELFAVYPQPTNTEAETE 523
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 134 HRKSQSLDVTATRRD--RQHSQPVKESRFRCIFPYPPNSEYELE 259
H+ +S++ +R+ R S P +E ++P P N+E E E
Sbjct: 481 HKCRRSINDIERKREIVRLGSDPKEELELFAVYPQPTNTEAETE 524
>Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical
protein K01C8.1 protein.
Length = 499
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 77 VHDHHHSHRSTTEGPWQTQHRK 142
+H H HSH ST P +T H +
Sbjct: 11 IHHHDHSHEST---PQKTHHHR 29
>U64845-4|AAC48029.1| 623|Caenorhabditis elegans Hypothetical
protein F45F2.7 protein.
Length = 623
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 71 YTVHDHHHSHRSTTEGPW-QTQH 136
Y+ HHHSH++ P ++QH
Sbjct: 599 YSTKHHHHSHQTPINSPTSESQH 621
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 7 PGRELIRHEGRPQPT*GPQHGLYRARPSPFAQKHNGRTMADAAP*VPISR 156
PG + EG P PQHG + A P P R + P P R
Sbjct: 98 PGYPVPGQEGHQVPA--PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPR 145
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 21 NSARGATATDIRTATRSIPCTTITIRT 101
N R T+T + ++P TT+T+RT
Sbjct: 801 NRKRMRTSTTTKAPRTTVPPTTVTVRT 827
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,227,035
Number of Sequences: 27780
Number of extensions: 150740
Number of successful extensions: 619
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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