Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C06
         (235 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   0.47 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    22   3.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    21   4.4  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    21   5.8  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 146 SSVSQHRKPLIVILNIYFIDNWIIIPRNGF 57
           +SV  H   L++IL+ + +  W+I P+N F
Sbjct: 373 ASVYSHWVFLVIILHWFSMFLWLISPKNVF 402


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  RGSLIKDLSGMSRWKNPL 66
           +G ++KD++ M+ W N +
Sbjct: 290 KGKVVKDINQMTTWWNKI 307


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 222 QMRRRGAISYAPSAGSRLQLKTLRLQLGQSTP*TFD 115
           +++R+   S + S   R +++     LG STP +FD
Sbjct: 3   ELKRKPTSSCSRSPARRRRIQGHSDPLGHSTPGSFD 38


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 60  PVAGNYYPVVNEIYIENDDQRFT 128
           PVAGN+Y    + Y+      FT
Sbjct: 186 PVAGNFYQAQYDDYVPELYATFT 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,653
Number of Sequences: 2352
Number of extensions: 4271
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)