Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C06
(235 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 66 2e-12
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 50 3e-07
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 50 3e-07
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 40 2e-04
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 29 0.44
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 29 0.44
Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 25 5.4
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 25 5.4
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 25 5.4
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 25 5.4
U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 25 5.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 25 5.4
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 25 5.4
Z93389-3|CAB07672.1| 135|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 25 7.2
CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical... 25 9.5
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 66.5 bits (155), Expect = 2e-12
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +3
Query: 57 EPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGE 233
EP+AGNYYP+ + YI++++ +F+V+TDRA G + +G +++M+HRR +DD FGV E
Sbjct: 736 EPIAGNYYPITSFGYIKDENAQFSVITDRAQGMVA-SDGVVEIMLHRRCFYDDHFGVEE 793
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical protein
F58H1.1b protein.
Length = 1145
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 60 PVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGV 227
P N+YP+ +YIE+D R ++ + +A G +SL G+I++M+ RRL DD G+
Sbjct: 915 PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGL 970
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical protein
F58H1.1a protein.
Length = 1143
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 60 PVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGV 227
P N+YP+ +YIE+D R ++ + +A G +SL G+I++M+ RRL DD G+
Sbjct: 913 PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGL 968
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical protein
F48C1.1 protein.
Length = 1064
Score = 39.9 bits (89), Expect = 2e-04
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 60 PVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVG 230
PV NYYP+ +++ QR +++++ G L G +++ + R L DD G+G
Sbjct: 839 PVQSNYYPMPTAAVLQSGKQRLSIVSNVEHGARFLESGTVEINIDRILNQDDGKGLG 895
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 235 SSPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVN 122
S+ +P SSWSN LL S + P T PP R+ + N
Sbjct: 550 STASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASN 589
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 235 SSPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVN 122
S+ +P SSWSN LL S + P T PP R+ + N
Sbjct: 550 STASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASN 589
>Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical
protein ZK1098.6 protein.
Length = 278
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 224 SKCVVVEQSPMHHQLDLAFN*RRSACSSVSQHRKPLIVILNIYFI 90
S C V + ++ ++D+ R+ SVSQH P+ ++L + FI
Sbjct: 232 STCPVADHHILNQRIDVLQRQRKILVESVSQH-FPMFLLLILLFI 275
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 2411 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 2438
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 2411 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 2438
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 714 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 741
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 42 NVTLEEPVAGNYYPVVNEIYIENDDQRFTV 131
NVT+ P++ NY +V Y ++Q + V
Sbjct: 40 NVTIPMPISSNYRRIVEPTYGVKEEQLYRV 69
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 118 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 156
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 72 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 110
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 118 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 156
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 118 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 156
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 72 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 110
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 118 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 156
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 42 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 80
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 39 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 77
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 45 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 83
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 32 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 70
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 18 VLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVL 134
VL K P ++ P NY PV+NE + + F+++
Sbjct: 22 VLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMI 60
>U97407-1|AAB52478.2| 411|Caenorhabditis elegans Hypothetical
protein C34G6.5 protein.
Length = 411
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 224 SKCVVVEQSPMHHQLDLAFN*RRSACSSVSQHRKPLIVILNIYFIDNWIIIPRNGFFQRD 45
S +V+E P +L F+ +R ++S R L + ++ NG+ RD
Sbjct: 96 SVAIVLEHFPHCTATELLFHSKRDLSFALSYFRNLLYAVAYLH---------HNGYVHRD 146
Query: 44 IPLRSFIKDP 15
I L +F+ P
Sbjct: 147 IKLSNFLYSP 156
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 2411 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 2438
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 2411 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 2438
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 93 EIYIENDDQRFTVLTDRAAGGASLVEGE 176
E+Y +DD+R ++T GG + + G+
Sbjct: 714 ELYTPDDDERLNIVTPVQIGGLAPLSGQ 741
>Z93389-3|CAB07672.1| 135|Caenorhabditis elegans Hypothetical
protein T13F3.4 protein.
Length = 135
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 72 NYYPVVNEIYIENDDQRFTVLTDRA 146
N+ P+ NEIY+E+D + + + A
Sbjct: 79 NWNPLPNEIYLEDDKMKVEKMKENA 103
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 51 LEEPVAGNYYPVVNE--IYIENDDQRFTVLTDR 143
+ EPV NY +NE I +END QR VL R
Sbjct: 80 ISEPV--NYEKFINERSIQLENDPQREIVLFPR 110
>Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical
protein R17.2 protein.
Length = 628
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 45 VTLEEPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEI 179
++ +A V + I D QRF V++ + G A L G+I
Sbjct: 385 ISYSSEIAKKVGTVSEGVAIIFDSQRFQVISSKCYGVAELASGDI 429
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 25.0 bits (52), Expect = 7.2
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 51 LEEPVAGNYYPVVNE--IYIENDDQRFTVLTDR 143
+ EPV NY +NE I +END QR VL R
Sbjct: 80 ISEPV--NYEKFINERSIQLENDPQREIVLFPR 110
>CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical
protein C50E10.11 protein.
Length = 353
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 220 NASSWSNLLCTISWISPSTKDAPPAARSVN 131
+ S+WS L +SWIS K A V+
Sbjct: 303 SVSTWSKALLRLSWISKFNKMTSENAHKVH 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,617,701
Number of Sequences: 27780
Number of extensions: 98657
Number of successful extensions: 285
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 57
effective length of database: 11,156,738
effective search space used: 223134760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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