Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C06
(235 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 1.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 4.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 4.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 20 4.6
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 6.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 6.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 6.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 19 8.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 19 8.0
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 1.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 75 YYPVVNEIYIENDDQRFTVLTDRAAGGASLV 167
++P N +E DDQ+ ++ + AS V
Sbjct: 223 FWPSFNSAALEGDDQQRAIINTLLSISASCV 253
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 12 KRVLNKRPQWNVTLEEPVAGNYYPV 86
KR+LN+ TLE PVA P+
Sbjct: 56 KRLLNELLSSYNTLERPVANESEPL 80
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 12 KRVLNKRPQWNVTLEEPVAGNYYPV 86
KR+LN+ TLE PVA P+
Sbjct: 56 KRLLNELLSSYNTLERPVANESEPL 80
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 19.8 bits (39), Expect = 4.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 39 WNVTLEEPVAGNYYPVVNEIY 101
W+ +L +PV + Y + + Y
Sbjct: 408 WSTSLRDPVFFSIYKTILDYY 428
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 19.8 bits (39), Expect = 4.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 39 WNVTLEEPVAGNYYPVVNEIY 101
W+ +L +PV + Y + + Y
Sbjct: 408 WSTSLRDPVFFSIYKTILDYY 428
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 19.8 bits (39), Expect = 4.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 39 WNVTLEEPVAGNYYPVVNEIY 101
W+ +L +PV + Y + + Y
Sbjct: 34 WSTSLRDPVFFSIYKTILDYY 54
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.4 bits (38), Expect = 6.0
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +3
Query: 45 VTLEEPVAGNYYPVVNEIYIENDDQRFTVLT 137
++ P+ Y PV+ E + DQ++ V++
Sbjct: 643 ISSSNPLNVPYGPVIPEQSLTYQDQQYQVVS 673
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.4 bits (38), Expect = 6.0
Identities = 11/50 (22%), Positives = 22/50 (44%)
Frame = -3
Query: 227 YSKCVVVEQSPMHHQLDLAFN*RRSACSSVSQHRKPLIVILNIYFIDNWI 78
Y V + L ++FN +R + Q P ++I+ + ++ WI
Sbjct: 219 YRNLTFVRREGEFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWI 268
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 6.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 178 ISPSTKDAPPAARSVNT 128
+ P T+ PP+A V T
Sbjct: 292 LPPETQPTPPSATLVGT 308
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 19.0 bits (37), Expect = 8.0
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -3
Query: 104 NIYFIDNWIIIP 69
+IYF+ N+ ++P
Sbjct: 369 SIYFLGNYSLVP 380
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 19.0 bits (37), Expect = 8.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 193 IGDCSTTTHL 222
I DCSTT+ L
Sbjct: 423 ISDCSTTSSL 432
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,855
Number of Sequences: 438
Number of extensions: 1222
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 3772710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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