Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_C05
         (257 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   5.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   9.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   9.8  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  RLCSCFNKNNILPLF 129
           +L  CF  NN++ +F
Sbjct: 117 KLLQCFIDNNLMKIF 131


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 28  LVISFNFLALKPFVFYSLKRLCSCFNKNN 114
           +V  F   ALKPF+    K L S  +  N
Sbjct: 441 IVTYFIVRALKPFIPAVTKSLASLTDAEN 469


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 123 FIPVNKYVIWKCGTN*LKILY 185
           F P  K VI KC    +  L+
Sbjct: 656 FYPDRKQVILKCNIQDMSFLF 676


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 123 FIPVNKYVIWKCGTN*LKILY 185
           F P  K VI KC    +  L+
Sbjct: 746 FYPDRKQVILKCNIQDMSFLF 766


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,643
Number of Sequences: 438
Number of extensions: 1067
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)