Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C02
(318 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY576779-1|AAT39521.1| 860|Homo sapiens nucleolar protein with ... 42 3e-04
AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein. 34 0.080
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 32 0.32
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 32 0.32
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 32 0.42
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 0.42
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 0.42
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 32 0.42
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 32 0.42
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 32 0.42
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 32 0.42
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 31 0.74
AK023011-1|BAB14357.1| 591|Homo sapiens protein ( Homo sapiens ... 29 3.0
M61877-1|AAA60577.1| 2429|Homo sapiens erythroid alpha spectrin ... 28 6.9
M61826-1|AAA60994.1| 2429|Homo sapiens alpha-spectrin protein. 28 6.9
BC146760-1|AAI46761.1| 1393|Homo sapiens RAB3 GTPase activating ... 28 6.9
AL445435-3|CAI15808.1| 1393|Homo sapiens rab3 GTPase-activating ... 28 6.9
AL353894-3|CAH73936.1| 2416|Homo sapiens spectrin, alpha, erythr... 28 6.9
AL353894-2|CAH73937.1| 2419|Homo sapiens spectrin, alpha, erythr... 28 6.9
AK021928-1|BAB13939.1| 206|Homo sapiens protein ( Homo sapiens ... 28 6.9
AF255648-1|AAG44636.1| 1393|Homo sapiens rGAP-iso protein. 28 6.9
AF004828-1|AAC35881.1| 1393|Homo sapiens rab3-GAP regulatory dom... 28 6.9
AB020646-1|BAA74862.2| 1393|Homo sapiens KIAA0839 protein protein. 28 6.9
Y07969-1|CAA69265.1| 249|Homo sapiens APRIL protein. 27 9.1
Y07569-1|CAA68855.1| 251|Homo sapiens PHAPI2a protein protein. 27 9.1
U70439-1|AAB37579.1| 251|Homo sapiens silver-stainable protein ... 27 9.1
U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog prot... 27 9.1
U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kin... 27 9.1
U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kin... 27 9.1
DQ925698-1|ABI51312.1| 542|Homo sapiens zinc finger protein 415... 27 9.1
BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven thro... 27 9.1
BC069668-1|AAH69668.1| 542|Homo sapiens ZNF415 protein protein. 27 9.1
BC063880-1|AAH63880.1| 542|Homo sapiens ZNF415 protein protein. 27 9.1
BC019658-1|AAH19658.1| 251|Homo sapiens acidic (leucine-rich) n... 27 9.1
BC013003-1|AAH13003.1| 251|Homo sapiens acidic (leucine-rich) n... 27 9.1
AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase, DNA-act... 27 9.1
AL354726-2|CAI15261.1| 156|Homo sapiens acidic (leucine-rich) n... 27 9.1
AL354726-1|CAI15260.1| 251|Homo sapiens acidic (leucine-rich) n... 27 9.1
AK223454-1|BAD97174.1| 250|Homo sapiens acidic (leucine-rich) n... 27 9.1
AK127766-1|BAC87121.1| 136|Homo sapiens protein ( Homo sapiens ... 27 9.1
>AY576779-1|AAT39521.1| 860|Homo sapiens nucleolar protein with
MIF4G domain 1 protein.
Length = 860
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 152 YIPPHLRNKDSTSD----PDLVLLKRQVKSVLNKLTGTNLHWACTSIERLYAGNSRNSV 316
YIPPH+R + T D +L LK+ VK +LN+L+ N+ +E LY +SR +
Sbjct: 338 YIPPHVRQAEETVDFKKKEELERLKKHVKGLLNRLSEPNMASISGQLEELYMAHSRKDM 396
>AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein.
Length = 733
Score = 34.3 bits (75), Expect = 0.080
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Frame = +2
Query: 11 HEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEG--------NVIKEEKGTYIPPH 166
H DD+E L E N K++ DV ++ + DKEG +I E+ T
Sbjct: 600 HGDDLEKLEALECSNNEKLEPGSDV--EVKDAELDKEGASKVKKYRKLILEQAKTTSLEL 657
Query: 167 LRNKDSTSDPDLVLLKRQVKSVLNKLTGTNLHWACTSIERLYA 295
+ + S P L++ + ++K +L+ L + + A +ERLY+
Sbjct: 658 VPEEPSEPVPPLIVDRERLKKLLDLLVDKSNNLAVDQLERLYS 700
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 116 KEGNVIKEEKGTYIPPHLRNKDST 187
+ G KG YIPPHLRNK+++
Sbjct: 26 QSGGASTASKGRYIPPHLRNKEAS 49
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 116 KEGNVIKEEKGTYIPPHLRNKDST 187
+ G KG YIPPHLRNK+++
Sbjct: 26 QSGGASTASKGRYIPPHLRNKEAS 49
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 25 DNQSGGSTASKGRYIPPHLRNREAT 49
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 113 DKEGNVIKEEKGTYIPPHLRNKDST 187
D + KG YIPPHLRN+++T
Sbjct: 37 DNQSGGSTASKGRYIPPHLRNREAT 61
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 31.1 bits (67), Expect = 0.74
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 116 KEGNVIKEEKGTYIPPHLRNKDST 187
+ G KG YIPPHLRN++++
Sbjct: 26 QSGGASTASKGRYIPPHLRNREAS 49
>AK023011-1|BAB14357.1| 591|Homo sapiens protein ( Homo sapiens
cDNA FLJ12949 fis, clone NT2RP2005336, weakly similar to
TRICHOHYALIN. ).
Length = 591
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +2
Query: 5 IRHEDDIEDLSG-DENETNVKVDEKPDVWEDIYGRKRDKEGNV-------IKEEKGTYIP 160
IR+ D +++L+ E + ++DE D KR +EG ++EEKG + P
Sbjct: 100 IRNPDSLKELTHLKEYWNDPELDEGERFLRDYILNKRYEEGEEEEEDEEEMEEEKGVHGP 159
Query: 161 PHLRNKDSTSDPDLVLLKRQ 220
P D +SD + LK+Q
Sbjct: 160 PVQLAVDGSSDEGELFLKKQ 179
>M61877-1|AAA60577.1| 2429|Homo sapiens erythroid alpha spectrin
protein.
Length = 2429
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 11 HEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
H D EDL + E N + WED+ GR +D++ ++ + +K
Sbjct: 1253 HPDATEDLQRQKMELN-------EAWEDLQGRTKDRKESLNEAQK 1290
>M61826-1|AAA60994.1| 2429|Homo sapiens alpha-spectrin protein.
Length = 2429
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 11 HEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
H D EDL + E N + WED+ GR +D++ ++ + +K
Sbjct: 1253 HPDATEDLQRQKMELN-------EAWEDLQGRTKDRKESLNEAQK 1290
>BC146760-1|AAI46761.1| 1393|Homo sapiens RAB3 GTPase activating
protein subunit 2 (non-catalytic) protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>AL445435-3|CAI15808.1| 1393|Homo sapiens rab3 GTPase-activating
protein, non-catalytic subunit (RAB3-GAP150) protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>AL353894-3|CAH73936.1| 2416|Homo sapiens spectrin, alpha,
erythrocytic 1 (elliptocytosis 2) protein.
Length = 2416
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 11 HEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
H D EDL + E N + WED+ GR +D++ ++ + +K
Sbjct: 1253 HPDATEDLQRQKMELN-------EAWEDLQGRTKDRKESLNEAQK 1290
>AL353894-2|CAH73937.1| 2419|Homo sapiens spectrin, alpha,
erythrocytic 1 (elliptocytosis 2) protein.
Length = 2419
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 11 HEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
H D EDL + E N + WED+ GR +D++ ++ + +K
Sbjct: 1253 HPDATEDLQRQKMELN-------EAWEDLQGRTKDRKESLNEAQK 1290
>AK021928-1|BAB13939.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ11866 fis, clone HEMBA1006973, highly similar to
Homo sapiens rab3-GAP regulatory domain mRNA. ).
Length = 206
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>AF255648-1|AAG44636.1| 1393|Homo sapiens rGAP-iso protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>AF004828-1|AAC35881.1| 1393|Homo sapiens rab3-GAP regulatory domain
protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>AB020646-1|BAA74862.2| 1393|Homo sapiens KIAA0839 protein protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 32 LSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLL 211
L D +++ D+ WE+ ++ ++EGN K +K +++ + + T+ DL+++
Sbjct: 34 LRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTN--DLMVI 91
Query: 212 KRQVKSV 232
R+ K+V
Sbjct: 92 AREQKAV 98
>Y07969-1|CAA69265.1| 249|Homo sapiens APRIL protein.
Length = 249
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 175 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 215
>Y07569-1|CAA68855.1| 251|Homo sapiens PHAPI2a protein protein.
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>U70439-1|AAB37579.1| 251|Homo sapiens silver-stainable protein
SSP29 protein.
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog protein.
Length = 1074
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 74 KPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNK 178
K D ++ + K + N+I EE+ Y PHL K
Sbjct: 1024 KLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGK 1058
>U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kinase
catalytic subunit protein.
Length = 4128
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 193 PRFSVVEKASQKCLKQINRYESPLGLHVNREIVCRQQ 303
PRF+ +K L + +SP+ L + E++CR+Q
Sbjct: 1734 PRFNNYVDCMKKFLDALELSQSPMLLELMTEVLCREQ 1770
>U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kinase
catalytic subunit protein.
Length = 4097
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 193 PRFSVVEKASQKCLKQINRYESPLGLHVNREIVCRQQ 303
PRF+ +K L + +SP+ L + E++CR+Q
Sbjct: 1734 PRFNNYVDCMKKFLDALELSQSPMLLELMTEVLCREQ 1770
>DQ925698-1|ABI51312.1| 542|Homo sapiens zinc finger protein 415
isoform 4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 ETNVKVDEKPDVWEDIYGRKRDKEGN-VIKE 139
E+ V+V KP WE I G K D N VIKE
Sbjct: 12 ESQVRVARKPKGWEWIKGVKTDLSRNCVIKE 42
>BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1074
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 74 KPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNK 178
K D ++ + K + N+I EE+ Y PHL K
Sbjct: 1024 KLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGK 1058
>BC069668-1|AAH69668.1| 542|Homo sapiens ZNF415 protein protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 ETNVKVDEKPDVWEDIYGRKRDKEGN-VIKE 139
E+ V+V KP WE I G K D N VIKE
Sbjct: 12 ESQVRVARKPKGWEWIKGVKTDLSRNCVIKE 42
>BC063880-1|AAH63880.1| 542|Homo sapiens ZNF415 protein protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 ETNVKVDEKPDVWEDIYGRKRDKEGN-VIKE 139
E+ V+V KP WE I G K D N VIKE
Sbjct: 12 ESQVRVARKPKGWEWIKGVKTDLSRNCVIKE 42
>BC019658-1|AAH19658.1| 251|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B protein.
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>BC013003-1|AAH13003.1| 251|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B protein.
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase,
DNA-activated, catalytic polypeptide protein.
Length = 4128
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 193 PRFSVVEKASQKCLKQINRYESPLGLHVNREIVCRQQ 303
PRF+ +K L + +SP+ L + E++CR+Q
Sbjct: 1734 PRFNNYVDCMKKFLDALELSQSPMLLELMTEVLCREQ 1770
>AL354726-2|CAI15261.1| 156|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B protein.
Length = 156
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 96 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 136
>AL354726-1|CAI15260.1| 251|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B protein.
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>AK223454-1|BAD97174.1| 250|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B variant
protein.
Length = 250
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKG 148
E+D +D G+E E DE+ D ED+ G + D E + +EE G
Sbjct: 177 EEDEDDEDGEEEE----FDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
>AK127766-1|BAC87121.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ45867 fis, clone OCBBF3003745. ).
Length = 136
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 199 IWVRSRIF--VSQMWRYICSFFLLNNIA--FFIPLPSINIFPHIRFFIHFNISFILI 41
IW+ +F + + Y+CS +L + +F + +I F FFIHF++ F+++
Sbjct: 5 IWMYKYLFKVLLSFFGYMCSSGILGSYGLWWFFDIKNIRFFSV--FFIHFSLVFLIL 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,438,661
Number of Sequences: 237096
Number of extensions: 817186
Number of successful extensions: 2380
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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