Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C02
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 43 4e-05
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 32 0.10
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 32 0.10
Z93385-3|CAB07636.1| 250|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical pr... 29 0.55
Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical pr... 29 0.73
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 29 0.96
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 29 0.96
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 28 1.3
AL117202-9|CAB57892.1| 352|Caenorhabditis elegans Hypothetical ... 28 1.3
AC024838-5|AAY43990.1| 301|Caenorhabditis elegans Hypothetical ... 28 1.3
Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical pr... 28 1.7
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 27 2.9
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 27 2.9
U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical pr... 27 2.9
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 27 2.9
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 27 2.9
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 27 2.9
Z81047-10|CAB02836.1| 215|Caenorhabditis elegans Hypothetical p... 27 3.9
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 27 3.9
AC024811-3|AAF60778.1| 209|Caenorhabditis elegans Hypothetical ... 27 3.9
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical p... 26 5.1
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 26 5.1
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 26 5.1
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 26 5.1
AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical... 26 5.1
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 26 5.1
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 26 5.1
AL008881-2|CAA15518.1| 103|Caenorhabditis elegans Hypothetical ... 26 6.8
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 26 6.8
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical p... 25 8.9
Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical p... 25 8.9
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 25 8.9
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 25 8.9
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 25 8.9
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 25 8.9
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 25 8.9
AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative pota... 25 8.9
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 25 8.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 25 8.9
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 25 8.9
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 43.2 bits (97), Expect = 4e-05
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKE-GNVIKEEKGTYIPPHLRNKDSTS 190
++ I ++S E ET+ +K + EDIYGRK +K G +IK + L D+TS
Sbjct: 266 DEKIVEISDSEIETSAP--KKSEETEDIYGRKINKSTGELIKFDPAA-ARKKLEELDATS 322
Query: 191 DP--DLVLLKRQVKSVLNKLTGTNLHWACTSIERLYAGNSRNSV 316
++R V S++NKL+ L + I L+A +S+N V
Sbjct: 323 STGEQKQRVERAVNSIINKLSDAMLIKSQQGIAELWANSSKNDV 366
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 31.9 bits (69), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDS 184
E +I LS D+NE ++ + +ED + + N IK+E+ Y+ H+R +S
Sbjct: 713 EAEILQLSKDKNEITARLKHDQEYFEDELAKLLNDSMN-IKKERDDYLTEHIRANES 768
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 31.9 bits (69), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDS 184
E +I LS D+NE ++ + +ED + + N IK+E+ Y+ H+R +S
Sbjct: 713 EAEILQLSKDKNEITARLKHDQEYFEDELAKLLNDSMN-IKKERDDYLTEHIRANES 768
>Z93385-3|CAB07636.1| 250|Caenorhabditis elegans Hypothetical
protein M01E5.4 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 41 DENETN-VKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLVLLK 214
D +E N V + K ++ E I ++G K + Y+PPHLR + ++ LK
Sbjct: 25 DRDEYNRVHEERKSEIRERIGSSDSSQDGEE-KAQSNVYVPPHLRRQKKENEEKFSALK 82
>Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical
protein F53B2.8 protein.
Length = 184
Score = 29.5 bits (63), Expect = 0.55
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 5 IRHEDDIEDLSGDENETNVKVDEKPDVWEDIYGRK--RDKEGNVIKEEKGTYIPPHLRNK 178
+ E+D+ D + + +VKV +K ++ G+K R K GNV K +K +R+K
Sbjct: 21 VEPEEDLGDAMSTQEKDDVKVGKKRAPKNNMGGKKRLRSKLGNVGKHQK------RVRSK 74
Query: 179 DSTSDPDLVLLKR 217
++T + L L++
Sbjct: 75 ENTPERKLEKLEK 87
>Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical
protein F55C9.7 protein.
Length = 523
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = +1
Query: 184 YF*PR----FSVVEKASQKCLKQINRYESPLGLHVNREI 288
YF PR FS++ K++ +C K +N S + + VN++I
Sbjct: 20 YFVPRDIINFSLISKSTLQCAKSLNLKASNIQIEVNKDI 58
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 28.7 bits (61), Expect = 0.96
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 20 DIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTY 154
DI+D DE+ ++V D++PD E+ + + V+ E+K Y
Sbjct: 25 DIDDNGDDEDRSDVDEDDEPDRMEEDDAEEIPQNQVVLHEDKKYY 69
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 28.7 bits (61), Expect = 0.96
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
EDD D D++E DE+ D ED + D+E +KEEK
Sbjct: 49 EDDDNDDDEDDDEEEEDEDEEEDEAED--EAEDDEENEEVKEEK 90
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKE 121
RH +ED DE+++ V DE D +E++ + +E
Sbjct: 155 RHPHLMEDTQDDEDDSEVDYDETGDSFEEVIHLRNGRE 192
>AL117202-9|CAB57892.1| 352|Caenorhabditis elegans Hypothetical
protein Y47D3A.12 protein.
Length = 352
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 74 KPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPD 199
KP++WE Y K ++ ++G I PHL DPD
Sbjct: 55 KPEIWEKFY----PKTEMIVTRKRGRVIFPHLDYNVKGLDPD 92
>AC024838-5|AAY43990.1| 301|Caenorhabditis elegans Hypothetical
protein Y59E9AL.8 protein.
Length = 301
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 56 NVKVDEKPDVWEDIYGRKRDKEGNV 130
N K +E D W +I+ KR+ EG +
Sbjct: 96 NKKFEESMDQWAEIFNEKRELEGTI 120
>Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical
protein F21A3.5 protein.
Length = 532
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 23 IEDLSGDENETNVKVDEK--PDVWEDIYGRKRDKEGNVIKEEK 145
IE+L + ETN KV+++ DVW DI R K V KEE+
Sbjct: 270 IENLQKEPEETN-KVEQQIDVDVWFDIALRNFAKHLKVAKEEQ 311
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 5 IRHEDDIEDLSGDENETNVKVDEKPDVWEDI 97
I+ E+++ED + +E + KV E+ D ED+
Sbjct: 230 IKEEEEVEDEADEETDVKEKVKEEEDEDEDM 260
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 84 CGKIFMEGRGIKKAMLLRRKKEHIY 158
CGK+F E +GI AM + +K Y
Sbjct: 1069 CGKLFREFQGIDNAMKISEEKSEQY 1093
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 44 ENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
++++ K+DEK D +DI K+D + KEEK
Sbjct: 136 KSKSKTKLDEKSDNNKDIKDEKKDDKKEGKKEEK 169
>U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical
protein K07E1.1 protein.
Length = 221
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 136 LNNIAFFIPLPSINIFPHIRFFIHFNISFIL 44
+ ++ FF LP++ P FF F+I F L
Sbjct: 12 VQSLVFFYNLPNLTFLPIETFFCEFSIFFFL 42
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 84 CGKIFMEGRGIKKAMLLRRKKEHIY 158
CGK+F E +GI AM + +K Y
Sbjct: 1069 CGKLFREFQGIDNAMKISEEKSEQY 1093
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 27.1 bits (57), Expect = 2.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 DENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSDPDLV-LLKR 217
D + N D+ D E++Y +KR+ E+G + HL STS P K
Sbjct: 46 DSSSKNRYEDDDSDD-EELYVKKRELT------EQGALLKRHLEKNSSTSGPKATDAWKT 98
Query: 218 QVKSVLNKLT 247
KSVL LT
Sbjct: 99 NKKSVLTGLT 108
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 122 GNVIKEEKGTYIPPHLRNKD 181
GN G Y+PPHLR D
Sbjct: 12 GNAALNRGGRYVPPHLRGGD 31
>Z81047-10|CAB02836.1| 215|Caenorhabditis elegans Hypothetical
protein C41G6.12 protein.
Length = 215
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 306 LLLPAYNLSIDVQAQWRFVPVNLFKTLLTCLF 211
LL P ++L+IDVQ+ W F + + T +F
Sbjct: 179 LLPPLFDLNIDVQSGWIFCIFGSYSSFDTIVF 210
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 98 YGRKRDKEGNVIKEEKGTYIPPHLRNKDSTSD 193
Y R++ K G++ + K Y+P ++ NKD+ ++
Sbjct: 28 YTREQYKFGSIQEHLKAKYVPGYIPNKDAFNE 59
>AC024811-3|AAF60778.1| 209|Caenorhabditis elegans Hypothetical
protein Y54E10BL.3 protein.
Length = 209
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 291 YNLSIDVQAQWRFVPVNLFKTLLTCLFNNTKSGSEVESLFLKCGG 157
YNL V++ F+PV LT ++ N+K+ E E+ KCGG
Sbjct: 133 YNL---VESVHVFIPVVALLVFLTVIYINSKTPDEPEA-GQKCGG 173
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGR 106
DD ED D+++T +K KP + D GR
Sbjct: 119 DDDEDDEEDDDKTKIKKIRKPKIKSDNSGR 148
>Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical
protein ZC482.4 protein.
Length = 550
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 222 TCLFNNTKSGSEVESLFLKCGGIY 151
TC+FN T+ S+ F KC +Y
Sbjct: 35 TCVFNETEINSKTIKKFPKCDRVY 58
>Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 261 WRFVPVNLFKTLLTCLFNNTKSGSEVESLFLK 166
W +P+ LFKT T F S S + +FL+
Sbjct: 61 WPLIPIRLFKTGFTFFFPLEASQSYLLCIFLR 92
>Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 23 IEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPP 163
+ED+ E + K E PD + D GR R E + K+ PP
Sbjct: 18 VEDVYNTVEEVDGKEYEDPDYFYDELGRVRRSERRMAKKVPMMATPP 64
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGR 106
DD ED D+++T +K KP + D GR
Sbjct: 119 DDDEDDEEDDDKTKIKKIRKPKIKSDNSGR 148
>Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 23 IEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPP 163
+ED+ E + K E PD + D GR R E + K+ PP
Sbjct: 18 VEDVYNTVEEVDGKEYEDPDYFYDELGRVRRSERRMAKKVPMMATPP 64
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGR 106
DD ED D+++T +K KP + D GR
Sbjct: 119 DDDEDDEEDDDKTKIKKIRKPKIKSDNSGR 148
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
D ED DE + K DEK D E K+D + + K+EK
Sbjct: 100 DKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEK 142
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVK--VDEKPDVWEDIYGRKRDKEGNVIKEEK 145
+ EDD +D DE++ + K DEK D E+ K+D++ + K+EK
Sbjct: 101 KKEDDKKDEKKDEDKKDEKKDADEKKD--EEKKDDKKDEKKDEKKDEK 146
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGR 106
DD ED D+++T +K KP + D GR
Sbjct: 119 DDDEDDEEDDDKTKIKKIRKPKIKSDNSGR 148
>AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 261 WRFVPVNLFKTLLTCLFNNTKSGSEVESLFLK 166
W +P+ LFKT T F S S + +FL+
Sbjct: 61 WPLIPIRLFKTGFTFFFPLEASQSYLLCIFLR 92
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVKVDEKPDVWEDIYGR 106
RH DDI++LS D T +++D+ + D+ R
Sbjct: 538 RHNDDIDNLSKD--STEMRLDDYETILADLNSR 568
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 17 DDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEK 145
D ED DE + K DEK D E K+D + + K+EK
Sbjct: 100 DKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEK 142
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVK--VDEKPDVWEDIYGRKRDKEGNVIKEEK 145
+ EDD +D DE++ + K DEK D E+ K+D++ + K+EK
Sbjct: 101 KKEDDKKDEKKDEDKKDEKKDADEKKD--EEKKDDKKDEKKDEKKDEK 146
>AL008881-2|CAA15518.1| 103|Caenorhabditis elegans Hypothetical
protein Y9C2UA.2 protein.
Length = 103
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 11 HEDDIEDLSGDE-NETNVKVD 70
HED IED+ GDE E V +D
Sbjct: 67 HEDIIEDVGGDEVEEEEVDID 87
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKE 121
+ EDD +D DE + + K D+K D E+ K++ E
Sbjct: 93 KKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDE 130
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 255 FVPVNLFKTLLTCLFNNTKSGS 190
+VP++L K ++TCL +N K S
Sbjct: 647 YVPLSLNKGIVTCLMSNGKLSS 668
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 255 FVPVNLFKTLLTCLFNNTKSGS 190
+VP++L K ++TCL +N K S
Sbjct: 647 YVPLSLNKGIVTCLMSNGKLSS 668
>Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical
protein F55C5.3b protein.
Length = 579
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 199 IWVRSRIFVSQMWRYICSFFLLNNIAFFIPLPSI---NIFPHIRFFIHFNISFILI 41
+W+ F+ ++W Y ++F FF L +I ++ FI FN++ LI
Sbjct: 372 LWIMISAFIVRLWEYEWTYFTAFYF-FFTSLTTIGLGDVVTKTPNFIIFNLAMTLI 426
>Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical
protein F55C5.3a protein.
Length = 569
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 199 IWVRSRIFVSQMWRYICSFFLLNNIAFFIPLPSI---NIFPHIRFFIHFNISFILI 41
+W+ F+ ++W Y ++F FF L +I ++ FI FN++ LI
Sbjct: 372 LWIMISAFIVRLWEYEWTYFTAFYF-FFTSLTTIGLGDVVTKTPNFIIFNLAMTLI 426
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVK---VDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHL 169
++E D+ + DE T + + E + + + + R+K G ++ +K Y+P HL
Sbjct: 63 KYESDMLSIFEDERTTPNQFGSITELAEFYMEFPEKLREKNGLFLELKKPVYVPYHL 119
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 29 DLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKD 181
+L+ D TNV V P V E + G K GN I+ + +P H+ K+
Sbjct: 454 NLNEDPALTNVIVHFIP-VGESVVGNKPTSSGNFIQMSGLSILPQHVTLKN 503
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNV 130
+DD+ L GD+ E N K + D D D+E +
Sbjct: 749 DDDLGSLDGDQEEYNSKSSDSEDADLDDDDEDDDEEAEI 787
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNV 130
+DD+ L GD+ E N K + D D D+E +
Sbjct: 786 DDDLGSLDGDQEEYNSKSSDSEDADLDDDDEDDDEEAEI 824
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 255 FVPVNLFKTLLTCLFNNTKSGS 190
+VP++L K ++TCL +N K S
Sbjct: 647 YVPLSLNKGIVTCLMSNGKLSS 668
>AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative
potassium channel subunitn2P24 protein.
Length = 569
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 199 IWVRSRIFVSQMWRYICSFFLLNNIAFFIPLPSI---NIFPHIRFFIHFNISFILI 41
+W+ F+ ++W Y ++F FF L +I ++ FI FN++ LI
Sbjct: 372 LWIMISAFIVRLWEYEWTYFTAFYF-FFTSLTTIGLGDVVTKTPNFIIFNLAMTLI 426
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 8 RHEDDIEDLSGDENETNVK---VDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHL 169
++E D+ + DE T + + E + + + + R+K G ++ +K Y+P HL
Sbjct: 63 KYESDMLSIFEDERTTPNQFGSITELAEFYMEFPEKLREKNGLFLELKKPVYVPYHL 119
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 14 EDDIEDLSGDENETNVKVDEKPDVWED 94
EDD ED GD+NE + D+ ED
Sbjct: 2459 EDDEEDEDGDQNEHEAEEDDHDREDED 2485
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 29 DLSGDENETNVKVDEKPDVWEDIYGRKRDKEGNVIKEEKGTYIPPHLRNKD 181
+L+ D TNV V P V E + G K GN I+ + +P H+ K+
Sbjct: 454 NLNEDPALTNVIVHFIP-VGESVVGNKPTSSGNFIQMSGLSILPQHVTLKN 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,769,358
Number of Sequences: 27780
Number of extensions: 135409
Number of successful extensions: 651
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -