Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C01
(127 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VUN3 Cluster: GTP-binding nuclear protein Ran-like; n... 41 0.005
UniRef50_P38543 Cluster: GTP-binding nuclear protein Ran; n=2; G... 40 0.011
UniRef50_Q6E6E6 Cluster: GTP-binding nuclear protein-like protei... 40 0.014
UniRef50_A2ELV0 Cluster: Small GTP-binding protein, putative; n=... 37 0.077
UniRef50_A6R1W3 Cluster: GTP-binding nuclear protein GSP1/Ran; n... 37 0.10
UniRef50_Q554Y4 Cluster: GTP-binding nuclear protein Ran; n=5; E... 36 0.18
UniRef50_Q0KHU4 Cluster: CG34104-PB, isoform B; n=5; Diptera|Rep... 34 0.54
UniRef50_UPI00015559DD Cluster: PREDICTED: hypothetical protein,... 34 0.71
UniRef50_Q1Q8T9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.71
UniRef50_A2EWL6 Cluster: Small GTP-binding protein, putative; n=... 34 0.71
UniRef50_A2E2M2 Cluster: Small GTP-binding protein, putative; n=... 34 0.71
UniRef50_Q8SS11 Cluster: GTP-BINDING NUCLEAR PROTEIN; n=1; Encep... 34 0.71
UniRef50_O14807 Cluster: Ras-related protein M-Ras precursor; n=... 34 0.71
UniRef50_Q7YT71 Cluster: Rif protein; n=1; Ciona intestinalis|Re... 33 0.94
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 33 0.94
UniRef50_Q6YI57 Cluster: Polyprotein; n=1; Sclerotinia sclerotio... 33 1.2
UniRef50_Q75E12 Cluster: ABL139Cp; n=2; Saccharomycetaceae|Rep: ... 33 1.2
UniRef50_Q29FU5 Cluster: GA11396-PA; n=2; Sophophora|Rep: GA1139... 33 1.6
UniRef50_A1C5M7 Cluster: RAN small monomeric GTPase (Ran), putat... 33 1.6
UniRef50_A7HMG9 Cluster: ABC transporter related; n=1; Fervidoba... 32 2.2
UniRef50_Q4AC22 Cluster: Dynein heavy chain 9; n=2; Chlamydomona... 32 2.9
UniRef50_Q4CYJ7 Cluster: Putative uncharacterized protein; n=3; ... 32 2.9
UniRef50_UPI00005A1898 Cluster: PREDICTED: similar to Rho-relate... 31 3.8
UniRef50_Q6AW65 Cluster: EhRab7D protein; n=1; Entamoeba histoly... 31 3.8
UniRef50_Q4DVZ3 Cluster: Small GTP-binding protein, putative; n=... 31 3.8
UniRef50_A2FAP9 Cluster: Ras family protein; n=1; Trichomonas va... 31 3.8
UniRef50_Q4WDZ1 Cluster: RAN small monomeric GTPase (Ran), putat... 31 3.8
UniRef50_UPI0000F3228D Cluster: UPI0000F3228D related cluster; n... 31 5.0
UniRef50_A2EU59 Cluster: Small GTP-binding protein, putative; n=... 31 5.0
UniRef50_P51151 Cluster: Ras-related protein Rab-9; n=43; Eukary... 31 5.0
UniRef50_Q5BVW6 Cluster: SJCHGC06044 protein; n=1; Schistosoma j... 31 6.6
UniRef50_A7S7Y6 Cluster: Predicted protein; n=1; Nematostella ve... 31 6.6
UniRef50_A2EI68 Cluster: Ras family protein; n=1; Trichomonas va... 31 6.6
UniRef50_P19073 Cluster: Cell division control protein 42 precur... 31 6.6
UniRef50_P60953 Cluster: Cell division control protein 42 homolo... 31 6.6
UniRef50_UPI00005888CB Cluster: PREDICTED: similar to ras homolo... 30 8.8
UniRef50_Q4JKN3 Cluster: P7; n=1; Heliothis armigera cypovirus 5... 30 8.8
UniRef50_Q76H46 Cluster: ORF7; n=2; root|Rep: ORF7 - Enterobacte... 30 8.8
UniRef50_Q8IKX2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q5NT00 Cluster: Small GTPase EhRabX16; n=1; Entamoeba h... 30 8.8
UniRef50_Q3SDM4 Cluster: Rab_B46 protein; n=2; Paramecium tetrau... 30 8.8
UniRef50_A2F731 Cluster: Small GTP-binding protein, putative; n=... 30 8.8
UniRef50_A2DTS3 Cluster: Ras family protein; n=1; Trichomonas va... 30 8.8
>UniRef50_Q9VUN3 Cluster: GTP-binding nuclear protein Ran-like;
n=88; Eukaryota|Rep: GTP-binding nuclear protein
Ran-like - Drosophila melanogaster (Fruit fly)
Length = 217
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKRH 125
FK +L+GDGGTGKTT VKRH
Sbjct: 11 FKLILIGDGGTGKTTLVKRH 30
>UniRef50_P38543 Cluster: GTP-binding nuclear protein Ran; n=2;
Giardia intestinalis|Rep: GTP-binding nuclear protein
Ran - Giardia lamblia (Giardia intestinalis)
Length = 226
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3
Query: 54 DMPTFKCVLVGDGGTGKTTFVKRH 125
D +FK +LVGDG TGKTTFV RH
Sbjct: 3 DPISFKVILVGDGATGKTTFVTRH 26
>UniRef50_Q6E6E6 Cluster: GTP-binding nuclear protein-like protein;
n=1; Antonospora locustae|Rep: GTP-binding nuclear
protein-like protein - Antonospora locustae (Nosema
locustae)
Length = 213
Score = 39.5 bits (88), Expect = 0.014
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKR 122
+AD FK VLVGDGGTGKTT++ R
Sbjct: 2 VADRRTKFKVVLVGDGGTGKTTYIHR 27
>UniRef50_A2ELV0 Cluster: Small GTP-binding protein, putative; n=2;
Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
putative - Trichomonas vaginalis G3
Length = 194
Score = 37.1 bits (82), Expect = 0.077
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKR 122
M D+P FK V VGD G GKT+ VKR
Sbjct: 1 MDSDIPEFKVVTVGDSGVGKTSLVKR 26
>UniRef50_A6R1W3 Cluster: GTP-binding nuclear protein GSP1/Ran; n=1;
Ajellomyces capsulatus NAm1|Rep: GTP-binding nuclear
protein GSP1/Ran - Ajellomyces capsulatus NAm1
Length = 418
Score = 36.7 bits (81), Expect = 0.10
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 78 LVGDGGTGKTTFVKRH 125
LVGDGG GKTTFVKRH
Sbjct: 47 LVGDGGVGKTTFVKRH 62
>UniRef50_Q554Y4 Cluster: GTP-binding nuclear protein Ran; n=5;
Eukaryota|Rep: GTP-binding nuclear protein Ran -
Dictyostelium discoideum AX4
Length = 754
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 69 KCVLVGDGGTGKTTFVKRH 125
K +LVGD G GKTTF+KRH
Sbjct: 54 KLILVGDSGVGKTTFLKRH 72
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFVKR 122
+ + D+ K VL+GDGG GK+T++ R
Sbjct: 503 VVKKFDNTKEIKLVLIGDGGVGKSTYINR 531
>UniRef50_Q0KHU4 Cluster: CG34104-PB, isoform B; n=5; Diptera|Rep:
CG34104-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 582
Score = 34.3 bits (75), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFV 116
+A P+ KCVLVGDG GKT +
Sbjct: 386 IAQPQPSIKCVLVGDGAVGKTNLI 409
>UniRef50_UPI00015559DD Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 99
Score = 33.9 bits (74), Expect = 0.71
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 48 ADDMPTFKCVLVGDGGTGKT 107
+D++PT+K V+VGDGG GK+
Sbjct: 8 SDNLPTYKLVVVGDGGVGKS 27
>UniRef50_Q1Q8T9 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter cryohalolentis K5|Rep: Putative
uncharacterized protein - Psychrobacter cryohalolentis
(strain K5)
Length = 806
Score = 33.9 bits (74), Expect = 0.71
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFV 116
+TE D+ + C++ GDGG GKTTF+
Sbjct: 259 LTEWYSDVDSRVCLIYGDGGYGKTTFI 285
>UniRef50_A2EWL6 Cluster: Small GTP-binding protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
putative - Trichomonas vaginalis G3
Length = 200
Score = 33.9 bits (74), Expect = 0.71
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 57 MPTFKCVLVGDGGTGKTTFVKR 122
+PT+K ++VGD GTGKT+ V R
Sbjct: 4 IPTYKVLVVGDSGTGKTSLVDR 25
>UniRef50_A2E2M2 Cluster: Small GTP-binding protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
putative - Trichomonas vaginalis G3
Length = 197
Score = 33.9 bits (74), Expect = 0.71
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFVK 119
++E+ + PT KC++VG G GKT+ ++
Sbjct: 1 MSEIKKETPTLKCIVVGSSGVGKTSLIE 28
>UniRef50_Q8SS11 Cluster: GTP-BINDING NUCLEAR PROTEIN; n=1;
Encephalitozoon cuniculi|Rep: GTP-BINDING NUCLEAR
PROTEIN - Encephalitozoon cuniculi
Length = 214
Score = 33.9 bits (74), Expect = 0.71
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 63 TFKCVLVGDGGTGKTTFVKR 122
T+K L+GDGG GKTT++ R
Sbjct: 7 TYKICLIGDGGVGKTTYINR 26
>UniRef50_O14807 Cluster: Ras-related protein M-Ras precursor; n=18;
Euteleostomi|Rep: Ras-related protein M-Ras precursor -
Homo sapiens (Human)
Length = 208
Score = 33.9 bits (74), Expect = 0.71
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 48 ADDMPTFKCVLVGDGGTGKT 107
+D++PT+K V+VGDGG GK+
Sbjct: 8 SDNLPTYKLVVVGDGGVGKS 27
>UniRef50_Q7YT71 Cluster: Rif protein; n=1; Ciona intestinalis|Rep:
Rif protein - Ciona intestinalis (Transparent sea
squirt)
Length = 249
Score = 33.5 bits (73), Expect = 0.94
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 51 DDMPTFKCVLVGDGGTGKTTFV 116
+ P KCV+VGDGG GKT+ +
Sbjct: 14 EQQPKIKCVIVGDGGCGKTSML 35
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 33.5 bits (73), Expect = 0.94
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 42 EMADDMPTFKCVLVGDGGTGKTTFVKR 122
E+ D +PTFK VLVGD GKT+ R
Sbjct: 13 EVKDQIPTFKIVLVGDPEVGKTSIFLR 39
>UniRef50_Q6YI57 Cluster: Polyprotein; n=1; Sclerotinia sclerotiorum
debilitation-associated RNA virus|Rep: Polyprotein -
Sclerotinia sclerotiorum debilitation-associated RNA
virus
Length = 1700
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 57 MPTFKCVLVGDGGTGKTTFVKR 122
M + CV++G GG GKTTFV++
Sbjct: 859 MSVYTCVILGAGGAGKTTFVEK 880
>UniRef50_Q75E12 Cluster: ABL139Cp; n=2; Saccharomycetaceae|Rep:
ABL139Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 294
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 42 EMADDMPTFKCVLVGDGGTGKTTFV 116
+ AD M + KCV++GDG GKT+ +
Sbjct: 12 QAADTMRSIKCVVIGDGAVGKTSLL 36
>UniRef50_Q29FU5 Cluster: GA11396-PA; n=2; Sophophora|Rep:
GA11396-PA - Drosophila pseudoobscura (Fruit fly)
Length = 857
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 60 PTFKCVLVGDGGTGKTTFV 116
P+ KCVLVGDG GKT +
Sbjct: 492 PSIKCVLVGDGAVGKTNLI 510
>UniRef50_A1C5M7 Cluster: RAN small monomeric GTPase (Ran),
putative; n=1; Aspergillus clavatus|Rep: RAN small
monomeric GTPase (Ran), putative - Aspergillus clavatus
Length = 472
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKRH 125
MA M FK +L+G+ G GKT F++R+
Sbjct: 1 MAATMRIFKVLLIGNSGVGKTAFLRRY 27
>UniRef50_A7HMG9 Cluster: ABC transporter related; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: ABC transporter
related - Fervidobacterium nodosum Rt17-B1
Length = 250
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 9 SYNPGLKI*--ITEMADDMPTFKCVLVGDGGTGKTTFVK 119
+Y PG + IT DD PT +VG+ G GKTTFVK
Sbjct: 12 AYKPGKYVLEDITLSFDDRPT---AIVGENGAGKTTFVK 47
>UniRef50_Q4AC22 Cluster: Dynein heavy chain 9; n=2; Chlamydomonas
reinhardtii|Rep: Dynein heavy chain 9 - Chlamydomonas
reinhardtii
Length = 4149
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 72 CVLVGDGGTGKTTFVKRH 125
C+ VG GTGKT +VKRH
Sbjct: 2100 CLFVGPTGTGKTAYVKRH 2117
>UniRef50_Q4CYJ7 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 491
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 39 TEMADDMP-TFKCVLVGDGGTGKTTFVKR 122
TE+ +++ FK V+VGD G GKT+ VKR
Sbjct: 21 TELNEELEFVFKVVVVGDYGVGKTSLVKR 49
>UniRef50_UPI00005A1898 Cluster: PREDICTED: similar to Rho-related
GTP-binding protein RhoG (Sid 10750); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Rho-related
GTP-binding protein RhoG (Sid 10750) - Canis familiaris
Length = 288
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 39 TEMADDMPTFKCVLVGDGGTGKT 107
T+ M T KCV+VGDG GKT
Sbjct: 4 TDSKGRMQTIKCVVVGDGAVGKT 26
>UniRef50_Q6AW65 Cluster: EhRab7D protein; n=1; Entamoeba
histolytica|Rep: EhRab7D protein - Entamoeba histolytica
Length = 204
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKRH 125
MA FK +L+GD G GKT+ + R+
Sbjct: 1 MAGRPALFKAILIGDSGVGKTSLINRY 27
>UniRef50_Q4DVZ3 Cluster: Small GTP-binding protein, putative; n=1;
Trypanosoma cruzi|Rep: Small GTP-binding protein,
putative - Trypanosoma cruzi
Length = 243
Score = 31.5 bits (68), Expect = 3.8
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKRH 125
FK +++G+GGTGKT ++R+
Sbjct: 11 FKVLIIGEGGTGKTCLIRRY 30
>UniRef50_A2FAP9 Cluster: Ras family protein; n=1; Trichomonas
vaginalis G3|Rep: Ras family protein - Trichomonas
vaginalis G3
Length = 202
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 54 DMPTFKCVLVGDGGTGKTTFVKR 122
D P+ K VL+GD G GKTT + R
Sbjct: 8 DAPSIKIVLLGDSGVGKTTCLTR 30
>UniRef50_Q4WDZ1 Cluster: RAN small monomeric GTPase (Ran),
putative; n=2; Trichocomaceae|Rep: RAN small monomeric
GTPase (Ran), putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 480
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKRH 125
M D TF +LVG+ G GKT F+ R+
Sbjct: 1 MTKDTRTFNVLLVGNSGVGKTAFLHRY 27
>UniRef50_UPI0000F3228D Cluster: UPI0000F3228D related cluster; n=1;
Bos taurus|Rep: UPI0000F3228D UniRef100 entry - Bos
Taurus
Length = 115
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 81 VGDGGTGKTTFVKRH 125
+GDGGTGKT VKRH
Sbjct: 45 IGDGGTGKTMSVKRH 59
>UniRef50_A2EU59 Cluster: Small GTP-binding protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
putative - Trichomonas vaginalis G3
Length = 192
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD GTGKT+ + R
Sbjct: 7 FKVVLIGDAGTGKTSMLNR 25
>UniRef50_P51151 Cluster: Ras-related protein Rab-9; n=43;
Eukaryota|Rep: Ras-related protein Rab-9 - Homo sapiens
(Human)
Length = 201
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 45 MADDMPTFKCVLVGDGGTGKTTFVKRH 125
MA FK +L+GDGG GK++ + R+
Sbjct: 1 MAGKSSLFKVILLGDGGVGKSSLMNRY 27
>UniRef50_Q5BVW6 Cluster: SJCHGC06044 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06044 protein - Schistosoma
japonicum (Blood fluke)
Length = 368
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFVKR 122
+TE FK +LVGD G GK++F+ R
Sbjct: 143 LTESLTPTRIFKVILVGDSGVGKSSFLYR 171
>UniRef50_A7S7Y6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 211
Score = 30.7 bits (66), Expect = 6.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 69 KCVLVGDGGTGKTTFV 116
KCV+VGDGG GKT+ +
Sbjct: 20 KCVIVGDGGVGKTSLL 35
>UniRef50_A2EI68 Cluster: Ras family protein; n=1; Trichomonas
vaginalis G3|Rep: Ras family protein - Trichomonas
vaginalis G3
Length = 201
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 51 DDMPTFKCVLVGDGGTGKTTFVKR 122
+D+P +K V++GD GKT+ + R
Sbjct: 8 EDLPEYKVVMLGDSNVGKTSIIHR 31
>UniRef50_P19073 Cluster: Cell division control protein 42
precursor; n=25; Eukaryota|Rep: Cell division control
protein 42 precursor - Saccharomyces cerevisiae (Baker's
yeast)
Length = 191
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 57 MPTFKCVLVGDGGTGKT 107
M T KCV+VGDG GKT
Sbjct: 1 MQTLKCVVVGDGAVGKT 17
>UniRef50_P60953 Cluster: Cell division control protein 42 homolog
precursor; n=56; Eukaryota|Rep: Cell division control
protein 42 homolog precursor - Homo sapiens (Human)
Length = 191
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 57 MPTFKCVLVGDGGTGKT 107
M T KCV+VGDG GKT
Sbjct: 1 MQTIKCVVVGDGAVGKT 17
>UniRef50_UPI00005888CB Cluster: PREDICTED: similar to ras homolog
gene family, member U; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ras homolog gene
family, member U - Strongylocentrotus purpuratus
Length = 288
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 69 KCVLVGDGGTGKTTFV 116
KCVLVGDG GKT+ V
Sbjct: 67 KCVLVGDGAVGKTSLV 82
>UniRef50_Q4JKN3 Cluster: P7; n=1; Heliothis armigera cypovirus
5|Rep: P7 - Heliothis armigera cypovirus 5
Length = 565
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFVKR 122
+ E+ + CVL+G+ G+GKTT KR
Sbjct: 348 LMEIESERKVVTCVLIGNKGSGKTTATKR 376
>UniRef50_Q76H46 Cluster: ORF7; n=2; root|Rep: ORF7 - Enterobacteria
phage ST104
Length = 94
Score = 30.3 bits (65), Expect = 8.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 38 YRNGR*YAYIQMCACWRWWNREN 106
YR+G+ + WRWWNR+N
Sbjct: 27 YRSGQWIVSVACSKGWRWWNRKN 49
>UniRef50_Q8IKX2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1844
Score = 30.3 bits (65), Expect = 8.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 71 FECRHIICHFCNLYL 27
++ RHI CH CN+YL
Sbjct: 668 YQIRHIYCHLCNIYL 682
>UniRef50_Q5NT00 Cluster: Small GTPase EhRabX16; n=1; Entamoeba
histolytica|Rep: Small GTPase EhRabX16 - Entamoeba
histolytica
Length = 203
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 51 DDMPTFKCVLVGDGGTGKTTFVKRH 125
+D FK +++GD GKT+ VKR+
Sbjct: 5 NDSIVFKIIVIGDANVGKTSLVKRY 29
>UniRef50_Q3SDM4 Cluster: Rab_B46 protein; n=2; Paramecium
tetraurelia|Rep: Rab_B46 protein - Paramecium
tetraurelia
Length = 197
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 63 TFKCVLVGDGGTGKTTFVKRH 125
TFK +L+GD GKT+ +KR+
Sbjct: 7 TFKIILLGDSNVGKTSILKRY 27
>UniRef50_A2F731 Cluster: Small GTP-binding protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
putative - Trichomonas vaginalis G3
Length = 196
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 60 PTFKCVLVGDGGTGKTTFVKR 122
PT+K +L+G+ G GKT KR
Sbjct: 9 PTYKIILLGNSGVGKTCIAKR 29
>UniRef50_A2DTS3 Cluster: Ras family protein; n=1; Trichomonas
vaginalis G3|Rep: Ras family protein - Trichomonas
vaginalis G3
Length = 239
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 69 KCVLVGDGGTGKTTFVKR 122
K +L+GDGG GKT F+ R
Sbjct: 9 KVILLGDGGVGKTKFISR 26
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,632,865
Number of Sequences: 1657284
Number of extensions: 1457030
Number of successful extensions: 10667
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 10433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10667
length of database: 575,637,011
effective HSP length: 22
effective length of database: 539,176,763
effective search space used: 10244358497
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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