Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_C01
(127 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 49 6e-07
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 49 6e-07
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 47 2e-06
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 29 0.53
02_05_1169 + 34656450-34656603,34657321-34657481,34657907-346579... 28 0.92
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 28 1.2
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 27 1.6
11_06_0708 + 26475306-26478404 27 2.1
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 27 2.1
09_02_0464 - 9591139-9591571,9592601-9592818 27 2.1
06_03_0414 - 20548577-20549006,20553521-20553744 27 2.1
05_07_0127 - 27872803-27873238,27873842-27874059 27 2.1
05_06_0082 - 25425050-25425479,25426551-25426783 27 2.1
05_03_0286 - 11623575-11624063,11625098-11625262 27 2.1
05_01_0036 + 253734-253904,255216-255707 27 2.1
03_06_0637 - 35219212-35219754,35220405-35220587 27 2.1
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 27 2.1
01_06_1343 - 36461476-36461961,36463355-36463519 27 2.1
01_06_0712 + 31397167-31397402,31399823-31400252 27 2.1
01_06_0186 + 27294973-27295211,27295610-27296045 27 2.1
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 27 2.8
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 27 2.8
11_02_0038 - 7631462-7634428,7635975-7636250 26 3.7
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 26 3.7
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 26 3.7
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 26 3.7
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 26 3.7
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 26 3.7
11_06_0707 + 26467214-26470309 26 4.9
11_06_0706 + 26460400-26462254,26462499-26462562,26462929-264629... 26 4.9
11_06_0698 + 26385989-26389090 26 4.9
11_06_0697 + 26371193-26371397,26371562-26374254 26 4.9
11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603... 26 4.9
11_02_0007 + 7283080-7283918,7284526-7285764,7286317-7286376,728... 26 4.9
11_02_0004 + 7260084-7260967,7261284-7263264,7263359-7263420,726... 26 4.9
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 26 4.9
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 25 6.5
12_02_0503 - 19756561-19757991,19758606-19759967 25 6.5
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 25 6.5
11_06_0437 - 23533218-23536382 25 6.5
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 25 6.5
04_04_1016 - 30139691-30139951,30140066-30140134,30141267-301414... 25 6.5
04_04_1009 - 30078988-30079248,30079363-30079431,30080564-300807... 25 6.5
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 25 8.6
02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031 25 8.6
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967... 25 8.6
01_03_0282 - 14580875-14580891,14582126-14585855 25 8.6
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 48.8 bits (111), Expect = 6e-07
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 54 DMPTFKCVLVGDGGTGKTTFVKRH 125
D P+FK V+VGDGGTGKTTFVKRH
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRH 33
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 48.8 bits (111), Expect = 6e-07
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 54 DMPTFKCVLVGDGGTGKTTFVKRH 125
D P+FK V+VGDGGTGKTTFVKRH
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRH 33
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 47.2 bits (107), Expect = 2e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 60 PTFKCVLVGDGGTGKTTFVKRH 125
P+FK +LVGDGGTGKTTFVKRH
Sbjct: 440 PSFKLILVGDGGTGKTTFVKRH 461
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 63 TFKCVLVGDGGTGKTTFVKRH 125
+FK VL+GDG GKT+ V R+
Sbjct: 14 SFKLVLLGDGRVGKTSLVLRY 34
>02_05_1169 +
34656450-34656603,34657321-34657481,34657907-34657958,
34658289-34658425,34658775-34658861,34658939-34659226
Length = 292
Score = 28.3 bits (60), Expect = 0.92
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 60 PTFKCVLVGDGGTGKTTFVK 119
P +C+L+G G+GKTT +K
Sbjct: 39 PGSRCLLIGANGSGKTTLLK 58
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 21 GLKI*ITEMADDMPTFKCVLVGDGGTGKTTFVK 119
G K+ +TE + + V++G+ GTGKTTF++
Sbjct: 364 GFKLSVTEGSFNDSQI-IVMLGENGTGKTTFIR 395
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 75 VLVGDGGTGKTTFVK 119
V++G+ GTGKTTF++
Sbjct: 377 VMLGENGTGKTTFIR 391
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 63 TFKCVLVGDGGTGKTTFVKR 122
T+K ++G GG GKTT ++
Sbjct: 193 TYKLAIIGTGGIGKTTLAQK 212
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 63 TFKCVLVGDGGTGKTTFVKR 122
T+K ++G GG GKTT ++
Sbjct: 193 TYKLAIIGTGGIGKTTLAQK 212
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 13 FKVVLIGDSGVGKSNLLSR 31
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 15 FKVVLIGDSGVGKSNLLSR 33
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 13 FKVVLIGDSGVGKSNLLSR 31
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 18 FKVVLIGDSGVGKSNLLSR 36
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 13 FKMVLIGDSGVGKSNILSR 31
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 15 FKVVLIGDSGVGKSNLLSR 33
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 19 FKIVLIGDSGVGKSNLLSR 37
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 13 FKIVLIGDSGVGKSNILSR 31
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 13 FKIVLIGDSGVGKSNILSR 31
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 19 FKTVLIGDSGVGKSNLLSR 37
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
FK VL+GD G GK+ + R
Sbjct: 20 FKVVLIGDSGVGKSNLLSR 38
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 45 MADDMPTF-KCVLVGDGGTGKT 107
MA F KCV VGDG GKT
Sbjct: 1 MASSASRFIKCVTVGDGAVGKT 22
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 45 MADDMPTF-KCVLVGDGGTGKT 107
MA F KCV VGDG GKT
Sbjct: 1 MASSASRFIKCVTVGDGAVGKT 22
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVK 119
FK +VG GG GKTT +
Sbjct: 274 FKVAIVGTGGVGKTTLAQ 291
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 69 KCVLVGDGGTGKT 107
KCV VGDG GKT
Sbjct: 9 KCVTVGDGAVGKT 21
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 69 KCVLVGDGGTGKT 107
KCV VGDG GKT
Sbjct: 8 KCVTVGDGAVGKT 20
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 69 KCVLVGDGGTGKT 107
KCV VGDG GKT
Sbjct: 8 KCVTVGDGAVGKT 20
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 69 KCVLVGDGGTGKT 107
KCV VGDG GKT
Sbjct: 8 KCVTVGDGAVGKT 20
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 69 KCVLVGDGGTGKT 107
KCV VGDG GKT
Sbjct: 12 KCVTVGDGAVGKT 24
>11_06_0707 + 26467214-26470309
Length = 1031
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 195 YKLAIVGTGGVGKTTLAQK 213
>11_06_0706 +
26460400-26462254,26462499-26462562,26462929-26462981,
26464400-26464401,26464528-26464598,26464938-26465020,
26465065-26465126
Length = 729
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 195 YKLAIVGTGGVGKTTLAQK 213
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 195 YKLAIVGTGGVGKTTLAQK 213
>11_06_0697 + 26371193-26371397,26371562-26374254
Length = 965
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 146 YKLAIVGTGGVGKTTLAQK 164
>11_06_0696 +
26358713-26359779,26359826-26360110,26360177-26360356,
26360516-26360585,26361051-26361950
Length = 833
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 195 YKLAIVGTGGVGKTTLAQK 213
>11_02_0007 +
7283080-7283918,7284526-7285764,7286317-7286376,
7287469-7287610
Length = 759
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 81 VGDGGTGKTTFVKR 122
VG GG+GKTT VK+
Sbjct: 203 VGSGGSGKTTLVKQ 216
>11_02_0004 +
7260084-7260967,7261284-7263264,7263359-7263420,
7263614-7263686
Length = 999
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +3
Query: 51 DDMPTFKCVL---VGDGGTGKTTFVKR 122
+ PT KC + VG GG GKTT ++
Sbjct: 194 ESTPTNKCSIISIVGQGGLGKTTLARQ 220
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 78 LVGDGGTGKTTFVK 119
++GDGG GKTT K
Sbjct: 287 IIGDGGIGKTTLAK 300
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 69 KCVLVGDGGTGKTTFVKR 122
K VL+GD GTGK++ V R
Sbjct: 13 KLVLLGDVGTGKSSLVLR 30
>12_02_0503 - 19756561-19757991,19758606-19759967
Length = 930
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 36 ITEMADDMPTFKCVLVGDGGTGKTTFVK 119
+T D C +VG GG GKTT +
Sbjct: 191 LTPNIRDQKLSLCAIVGAGGMGKTTLAQ 218
>12_01_1031 -
10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 45 MADDMPTFKCV-LVGDGGTGKTT 110
+AD P K +VG GG GKTT
Sbjct: 222 LADGEPKLKVASIVGSGGVGKTT 244
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 66 FKCVLVGDGGTGKTTFVKR 122
+K +VG GG GKTT ++
Sbjct: 215 YKLAIVGTGGIGKTTLAQK 233
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 75 VLVGDGGTGKTTFVK 119
+LVGD GTGK+ F+K
Sbjct: 370 LLVGDPGTGKSQFLK 384
>04_04_1016 -
30139691-30139951,30140066-30140134,30141267-30141470,
30141552-30141808,30141899-30141983,30142080-30142164,
30142269-30142795
Length = 495
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 78 LVGDGGTGKTTFVKR 122
L D G GKTTFV+R
Sbjct: 52 LAADSGCGKTTFVRR 66
>04_04_1009 -
30078988-30079248,30079363-30079431,30080564-30080767,
30080849-30081105,30081196-30081280,30081377-30081461,
30081566-30082092
Length = 495
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 78 LVGDGGTGKTTFVKR 122
L D G GKTTFV+R
Sbjct: 52 LAADSGCGKTTFVRR 66
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 75 VLVGDGGTGKTTFVK 119
+LVG+ GTGKTT V+
Sbjct: 521 LLVGETGTGKTTLVQ 535
>02_02_0591 - 11901947-11901984,11902394-11903786,11903846-11904031
Length = 538
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 78 LVGDGGTGKTTFVK 119
+VG GG GKTTFV+
Sbjct: 180 IVGMGGLGKTTFVQ 193
>01_03_0284 -
14595643-14595663,14595978-14596018,14596379-14596732,
14597023-14597494,14597524-14600001
Length = 1121
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 78 LVGDGGTGKTTFVK 119
+VG GG GKTTF K
Sbjct: 201 IVGMGGLGKTTFAK 214
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 78 LVGDGGTGKTTFVK 119
+VG GG GKTTF K
Sbjct: 201 IVGMGGLGKTTFAK 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,380,817
Number of Sequences: 37544
Number of extensions: 39828
Number of successful extensions: 426
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 22
effective length of database: 13,967,380
effective search space used: 265380220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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