Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B24
(281 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_05_0014 + 18392622-18392834,18393064-18393147,18393709-183937... 89 5e-19
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245... 81 1e-16
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 38 0.001
03_02_0715 + 10621789-10623243,10624074-10625018 31 0.14
01_06_0394 - 28977800-28978135,28978222-28978494,28978603-289790... 29 0.55
11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122 28 0.97
08_02_1243 - 25527523-25527960,25527993-25528604 28 1.3
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 27 1.7
12_01_0411 + 3276679-3276687,3277430-3277493,3278256-3278297,327... 27 2.2
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 27 2.2
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 27 2.2
03_05_0394 + 23758392-23758625,23759097-23759273,23759349-237594... 27 2.2
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 27 3.0
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 27 3.0
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 26 3.9
11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466,377... 26 3.9
10_01_0205 + 2202034-2202150,2202163-2202261,2202349-2202546,220... 26 3.9
07_03_0989 + 23161020-23161412 26 3.9
12_02_0750 + 22764481-22764771,22764871-22765383,22765470-227656... 26 5.2
07_03_1132 + 24196476-24197474 26 5.2
07_03_0254 + 15857809-15858018,15858151-15858264,15859809-158600... 26 5.2
06_02_0361 - 15168735-15168754,15168783-15169248 26 5.2
06_02_0016 - 10623796-10625317,10626493-10627541 26 5.2
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 25 6.8
11_01_0738 - 6218730-6220173,6221969-6223056 25 6.8
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177... 25 6.8
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 25 9.0
06_03_0561 - 22183140-22183185,22183273-22183442,22183554-221836... 25 9.0
05_05_0091 + 22319411-22320901 25 9.0
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 25 9.0
02_05_0850 + 32209798-32210086,32210779-32212316 25 9.0
>11_05_0014 +
18392622-18392834,18393064-18393147,18393709-18393797,
18393889-18394063,18394370-18394489,18394591-18394677,
18394755-18394826,18395166-18395279,18395387-18395487,
18395576-18395669,18395794-18395961,18396287-18396352,
18396475-18396531,18396708-18396927,18397015-18397151,
18397573-18397641,18397722-18397781,18397927-18397998,
18398171-18398218,18398376-18398495,18398743-18398808,
18399341-18399453,18399821-18399905,18400246-18400356,
18400436-18400531,18401075-18401143,18401235-18401453
Length = 974
Score = 89.0 bits (211), Expect = 5e-19
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGDS 245
LNVH+VPHTHDDVGWLKTVDQYY GSNN+IQ A VQ +LDS++P + R+ +Y +
Sbjct: 41 LNVHVVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPALLKDENRKFVYVEQA 100
Query: 246 F 248
F
Sbjct: 101 F 101
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 235 VETAFFWKWWVRQTE 279
VE AFF +WW +Q++
Sbjct: 97 VEQAFFQRWWRQQSD 111
>10_01_0232 +
2456449-2456652,2456814-2456897,2459113-2459201,
2459245-2459452,2459764-2459883,2460004-2460087,
2460171-2460242,2460342-2460455,2460852-2460952,
2461024-2461117,2461265-2461432,2461539-2461616,
2461908-2461973,2462052-2462108,2462353-2462572,
2462867-2463003,2465379-2465450,2465530-2465577,
2465681-2465806,2465982-2466047,2466508-2466620,
2467348-2467432,2467885-2467980,2468067-2468114,
2468190-2468258,2468393-2468581
Length = 935
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +3
Query: 6 ARGAGEACGYESCPDTPKDVLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILD 185
A A GY + LNVH+VPH+HDDVGWLKT+DQY+ G+NN+IQ A V LD
Sbjct: 18 AEAAVAFSGYNTSAGAVAGKLNVHLVPHSHDDVGWLKTIDQYFVGTNNSIQGACVMNTLD 77
Query: 186 SVIPRIWDFPKRRLIYGGDSF 248
SV+ + P R+ ++ +F
Sbjct: 78 SVVDALILDPARKFVFAEQAF 98
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGDS 245
L V + PH+H+D GW TV++YY + ++ILD++I + +R+ ++ S
Sbjct: 166 LKVFVAPHSHNDPGWRLTVEEYYEKQS--------RHILDTIIESLSKDSRRKFLWEEMS 217
Query: 246 FL 251
+L
Sbjct: 218 YL 219
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 132 NIGRLSSASRHRHVYGALYERLKRPS--VCPDNFHNRTLHRPLVPK 1
+ GR ++ S R +Y + L RPS + PD HN + H VP+
Sbjct: 702 SFGRHAALSERRQIYERFFMLLSRPSPTIRPDLCHNASEHGSSVPR 747
>01_06_0394 -
28977800-28978135,28978222-28978494,28978603-28979013,
28979157-28979273
Length = 378
Score = 29.1 bits (62), Expect = 0.55
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 42 CPDTPKDVLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYI 179
CPD P +NV V H + VG + Y N+T+QK + +
Sbjct: 7 CPDDPAPSMNVEAVLHMKEGVG------ETSYAKNSTLQKKSMDTV 46
>11_06_0522 + 24568070-24568571,24568710-24569825,24569968-24570122
Length = 590
Score = 28.3 bits (60), Expect = 0.97
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -3
Query: 147 YYFHNNIGRLSSASRHR---HVYGALYERLKRPSVC 49
YYFH N+ L+ RHR HV L+ L S+C
Sbjct: 339 YYFHANLTGLAHPERHRVPMHVDERLFVTLGLGSIC 374
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 119 CLQPADIVMCMGHYMNV*NVLRCVRTTFITARFTGP 12
C +P D+V+ + HYMN LR V + R GP
Sbjct: 188 CREPKDVVVSLWHYMN--KGLRAVCRWLLPVRQYGP 221
>04_03_0927 +
20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 114 KTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGDSFLLE 257
K ++QY + +N I+ A Y+LD I W +Y G LLE
Sbjct: 860 KVLEQYTFAKSNLIRNAARNYLLDYGIH--WGAAPAVKVYSGARPLLE 905
>12_01_0411 +
3276679-3276687,3277430-3277493,3278256-3278297,
3279047-3279063,3280011-3281258
Length = 459
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 96 HVYGALYERLKRPSVCPD 43
HV GA+Y + R S+CPD
Sbjct: 288 HVKGAIYWMVSRTSLCPD 305
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 167 TSFLYCVITSIIILVDCLQPADIVMCMG 84
+SFL ++T+ L L P DIV+C G
Sbjct: 122 SSFLALLVTACSTLKSMLYPPDIVVCAG 149
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 180 VYTGHQLFVLCYYFHNNIGRLSSASRHRHVYGALYERLKRPSVCP 46
V TGH +V+C FH + SAS + V L++ SV P
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISALRKKSVSP 174
>03_05_0394 +
23758392-23758625,23759097-23759273,23759349-23759453,
23759640-23759681,23759763-23759960,23760037-23760165,
23760248-23760377,23761119-23761179,23761241-23761322,
23761402-23761653
Length = 469
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 141 FHNNIGRLSSASRHRHVYGALYERLKRPSVCP 46
F + G+ S RH+H+Y A L+ PSV P
Sbjct: 191 FVKHFGQTRSIKRHKHIYQAY---LENPSVVP 219
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 257 FQKKAVSTVDQPSFWKIPY 201
+ KAV T+DQP+FW++ Y
Sbjct: 287 YANKAV-TIDQPAFWEMSY 304
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 257 FQKKAVSTVDQPSFWKIPY 201
+ KAV T+DQP+FW++ Y
Sbjct: 238 YANKAV-TIDQPAFWEMSY 255
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 198 RIWDFPKRRLIYGGDSF 248
R++DF K +LI+GG S+
Sbjct: 364 RVFDFSKEQLIFGGKSY 380
>11_01_0488 +
3770410-3770774,3771197-3771284,3771383-3771466,
3772128-3772224,3772324-3772411,3772800-3772848,
3773044-3773238,3773713-3774159
Length = 470
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 198 RIWDFPKRRLIYGGDSF 248
R++DF K +LI+GG S+
Sbjct: 215 RVFDFAKEQLIFGGKSY 231
>10_01_0205 +
2202034-2202150,2202163-2202261,2202349-2202546,
2203667-2203876
Length = 207
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 150 TIQKAGVQYILDSVIPRIWDFPKRRLIY 233
+I + +Q I+ V+P W P RRL++
Sbjct: 104 SIARPAIQLIMALVVPTAWLVPCRRLVH 131
>07_03_0989 + 23161020-23161412
Length = 130
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 120 VDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGD--SFLLEVVGQA 272
+D YY S+ +Q+ +++ D R W P + GD +F E++G A
Sbjct: 65 MDFYYDRSHGRVQRGTGRFLFDGRRLRGWQTPAELQMEDGDEVNFFEELIGGA 117
>12_02_0750 +
22764481-22764771,22764871-22765383,22765470-22765601,
22765731-22766108
Length = 437
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -1
Query: 278 SVCLTHHFQKKAVSTVDQPSFWKIPYSRYNRIEYILDTSFLYCVITSIIIL 126
S C T F + T+D P ++ S+ N + IL C++ ++L
Sbjct: 131 STCDTLQFPMETACTLDFPHLKELTLSQVNIADSILHGILSRCIVLESLVL 181
>07_03_1132 + 24196476-24197474
Length = 332
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 167 TSFLYCVITSIIILVDCLQPADIVMCMG 84
+SFL ++T+ L L P DIV+C G
Sbjct: 164 SSFLALLVTACSTLKFMLYPPDIVVCAG 191
>07_03_0254 +
15857809-15858018,15858151-15858264,15859809-15860010,
15860245-15860319,15860406-15860498,15860554-15860636,
15861067-15861180,15861632-15861746,15861840-15862030,
15862102-15862218,15862514-15862594,15862729-15862964,
15863219-15863258,15863393-15863968
Length = 748
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTV 122
LN I+PH DD+G L+ V
Sbjct: 644 LNFSIIPHFPDDIGRLRAV 662
>06_02_0361 - 15168735-15168754,15168783-15169248
Length = 161
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 255 PEESCLHRRSTFFLENPIFAV*QN 184
P+ESC H+ S+ F N I ++ +N
Sbjct: 104 PQESCSHKESSEFCPNSITSLCEN 127
>06_02_0016 - 10623796-10625317,10626493-10627541
Length = 856
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 203 YSRYNRIEYILDTSFLYCVITSIIIL 126
Y RYN Y TSF+ +I I++L
Sbjct: 745 YPRYNAFFYCNSTSFMASIIVIILLL 770
>12_01_0227 -
1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 141 SNNTIQKAGV--QYILDSVIPRIWDFPKRRL 227
S N + +GV ++IL+ ++PRI P+RRL
Sbjct: 760 SLNIFRISGVTGRWILERLLPRITPLPRRRL 790
>11_01_0738 - 6218730-6220173,6221969-6223056
Length = 843
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 224 PSFWKIPYSRYNRIEYILDTSFLYCVITSIIILVDCLQP 108
P + I RYN Y TSF+ + +++L L P
Sbjct: 729 PVLYDINMRRYNTFFYSNSTSFMASITVIVLLLQRMLSP 767
>11_01_0229 -
1771701-1774164,1774694-1774847,1774980-1775055,
1775439-1775477,1778516-1778674,1778741-1778851,
1779014-1779064,1779173-1779256
Length = 1045
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 141 SNNTIQKAGV--QYILDSVIPRIWDFPKRRL 227
S N + +GV ++IL+ ++PRI P+RRL
Sbjct: 208 SLNIFRISGVTGRWILERLLPRITPLPRRRL 238
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 180 VYTGHQLFVLCYYFHNNIGRLSSASRHRHVYGALYERLKRPSVCP 46
V TGH +V+C FH + SAS + V L++ +V P
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP 174
>06_03_0561 -
22183140-22183185,22183273-22183442,22183554-22183619,
22183911-22184010,22184072-22184164,22184259-22184352,
22185029-22185257,22185460-22185556,22187406-22187710
Length = 399
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 75 HIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRR 224
H V D GWL V+Q + Q G++Y L + R F KR+
Sbjct: 180 HAVMGKSDTFGWLAQVEQLFSMPLTIEQGQGIEYHLPHRVMR--QFGKRQ 227
>05_05_0091 + 22319411-22320901
Length = 496
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 264 PPLPEESCLHRRSTFFLENPIFAV*QNRVYTG 169
PPLP +H R + L +P+ A Q R +G
Sbjct: 249 PPLPPAEAVHSRLSKLLLHPMSAAAQPRSLSG 280
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 180 VYTGHQLFVLCYYFHNNIGRLSSASRHRHVYGALYERLKRPSVCP 46
V TGH +V+C FH + SAS + V L++ +V P
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP 174
>02_05_0850 + 32209798-32210086,32210779-32212316
Length = 608
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 167 TSFLYCVITSIIILVDCLQPADIVMC 90
++FLY V+T ++LVD D + C
Sbjct: 214 SAFLYAVLTGRVLLVDPSNEMDELFC 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,850,705
Number of Sequences: 37544
Number of extensions: 179930
Number of successful extensions: 617
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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