Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B24
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 79 6e-16
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 36 0.006
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 36 0.006
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 34 0.018
U64842-3|AAB37082.1| 218|Caenorhabditis elegans Hypothetical pr... 31 0.13
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 29 0.39
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 0.39
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 29 0.68
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 29 0.68
U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine rec... 27 1.6
AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine re... 27 1.6
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 2.7
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 2.7
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 26 3.6
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 26 3.6
U23517-4|AAB93335.1| 128|Caenorhabditis elegans Hypothetical pr... 26 4.8
AL132847-4|CAB63373.3| 965|Caenorhabditis elegans Hypothetical ... 25 6.3
AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical... 25 6.3
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 25 6.3
AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical ... 25 6.3
AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical ... 25 8.4
AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical ... 25 8.4
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 78.6 bits (185), Expect = 6e-16
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 15 AGEACGYESCPDTPKD--VLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDS 188
+ + C + +C +D V+ H++PHTHDD+GW+KTVDQY++G+ + GVQYI ++
Sbjct: 17 SSQDCAWNTCHKVDQDPNVITAHLIPHTHDDLGWIKTVDQYFWGAKPELVPVGVQYIYNT 76
Query: 189 VIPRIWDFPKRRLIYGGDSFL 251
VI + P RR + FL
Sbjct: 77 VIDELLKNPDRRFSFAETGFL 97
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGDS 245
L V ++PH+H D GW+ T ++YY + ILD + + + + R IY S
Sbjct: 181 LEVIVIPHSHCDPGWIMTFEEYY--------NRQTRNILDGMAKHLAEKDEMRFIYAEIS 232
Query: 246 F 248
F
Sbjct: 233 F 233
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYILDSVIPRIWDFPKRRLIYGGDS 245
L V ++PH+H D GW+ T ++YY + ILD + + + + R IY S
Sbjct: 179 LEVIVIPHSHCDPGWIMTFEEYY--------NRQTRNILDGMAKHLAEKDEMRFIYAEIS 230
Query: 246 F 248
F
Sbjct: 231 F 231
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 33.9 bits (74), Expect = 0.018
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 66 LNVHIVPHTHDDVGWLKTVDQYYYGSNNTI 155
L V+++P TH D GWL+T ++Y +N +
Sbjct: 137 LKVYVLPFTHVDPGWLETFERYTKSTNQIL 166
>U64842-3|AAB37082.1| 218|Caenorhabditis elegans Hypothetical
protein F25B4.4 protein.
Length = 218
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 154 YKKLVSSIYSILLYREYGIFQKEG*STVETAFF 252
YKKL+ S S++L+ + I ++ G ++VET F
Sbjct: 96 YKKLIDSSASVILFDDLSILEQFGATSVETTIF 128
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 123 DQYYYGSNNTIQKAGVQYILDSVIPRI-WDFPK 218
D YYG N + + + LDSV+ I +DFPK
Sbjct: 268 DVEYYGDNEDLPSTHISFRLDSVMQLINFDFPK 300
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 123 DQYYYGSNNTIQKAGVQYILDSVIPRI-WDFPK 218
D YYG N + + + LDSV+ I +DFPK
Sbjct: 268 DVEYYGDNEDLPSTHISFRLDSVMQLINFDFPK 300
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 28.7 bits (61), Expect = 0.68
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 15 AGEACGYESCPDTPKDVLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQ-KAGVQYILDS- 188
A A Y S + P DV+NVH+ + W ++Y G T++ G +++++S
Sbjct: 30 AQRALIYASVKNIPSDVINVHL----QEKPDWY--FSKHYKGQVPTLEHDEGKKHVIESA 83
Query: 189 VIPRIWD--FPKRRLI 230
VIP D +P+ R++
Sbjct: 84 VIPEYLDDIYPETRIL 99
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.7 bits (61), Expect = 0.68
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 15 AGEACGYESCPDTPKDVLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQ-KAGVQYILDS- 188
A A Y S + P DV+NVH+ + W ++Y G T++ G +++++S
Sbjct: 30 AQRALIYASVKNIPSDVINVHL----QEKPDWY--FSKHYKGQVPTLEHDEGKKHVIESA 83
Query: 189 VIPRIWD--FPKRRLI 230
VIP D +P+ R++
Sbjct: 84 VIPEYLDDIYPETRIL 99
>U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 8 protein.
Length = 316
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 275 VCLTHHFQKKAVSTVDQPSFWKIPYSRYNRIEYILDTSFLYCVITSIIILV 123
+ LT + + VD FWKI +SR + I F++ I S +L+
Sbjct: 123 IFLTTNRMSSVLWPVDHEKFWKINFSRILILNLIAPFFFIWNTIISKKVLI 173
>AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine
receptor, class x protein26 protein.
Length = 331
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 117 SSASRHRHVYGALYERLKRPSVCPDNFHNRTLHRPL 10
+S S R V+ RL P + NF N+ L+RPL
Sbjct: 273 ASNSELRSVFMKSEIRLSSPLIIDSNFQNQQLYRPL 308
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -2
Query: 220 LFGKSHIRG---ITESSIYWTPAFC 155
+FG + G +TE S+ WTP FC
Sbjct: 30 MFGDMLLAGEDLVTEDSLRWTPGFC 54
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 272 CLTHHFQKKAVSTVDQPSFWKIPYSRYNR 186
CLTH + STVD + + YS+Y R
Sbjct: 1897 CLTHPLFRYDCSTVDTTNLSRDEYSKYQR 1925
>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/31 (35%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +1
Query: 133 IMEVITQYKKLVSSIYSI-LLYREYGIFQKE 222
++EV TQ+ +S +Y++ ++YR++GIF ++
Sbjct: 1302 VVEVFTQFYTQLS-VYALPMIYRQFGIFIRQ 1331
>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/31 (35%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +1
Query: 133 IMEVITQYKKLVSSIYSI-LLYREYGIFQKE 222
++EV TQ+ +S +Y++ ++YR++GIF ++
Sbjct: 1302 VVEVFTQFYTQLS-VYALPMIYRQFGIFIRQ 1331
>U23517-4|AAB93335.1| 128|Caenorhabditis elegans Hypothetical
protein D1022.2 protein.
Length = 128
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 120 VDQYYYGSNNTIQKAGVQYILDS 188
+D+YY N Q+ GV+Y+ DS
Sbjct: 95 IDKYYDEDNKQQQENGVEYVEDS 117
>AL132847-4|CAB63373.3| 965|Caenorhabditis elegans Hypothetical
protein Y48G10A.4 protein.
Length = 965
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +3
Query: 39 SCPDTPKDVLNVHIVPHTHDDVGWLKTVDQYYYGSNNTIQKAGVQYIL 182
+C D DV+ + ++ + + K++D Y G+N+ V +L
Sbjct: 893 NCADYVTDVVAIELLSQHYHSMMMTKSLDTLYTGANSLSANKNVPQVL 940
>AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical
protein Y46G5A.25 protein.
Length = 600
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 137 WK**HNTKSWCPVYTRFCYTANMGF 211
W +N K+W T+ C++ ++GF
Sbjct: 252 WVALYNFKTWSAALTQLCFSLSIGF 276
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 180 VYTGHQLFVLCYYFHNNIGRLSSAS 106
+ TGH +V+C FH ++SAS
Sbjct: 132 ILTGHNHYVMCAQFHPTEDLVASAS 156
>AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical
protein Y119C1B.12 protein.
Length = 166
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 203 YSRYNRIEYILD-TSFLYCVITSIIILV 123
YS+ N+ + +L TSF+YC++ I+ +
Sbjct: 126 YSKNNQCDQLLYWTSFIYCILGLIVFAI 153
>AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.8 protein.
Length = 301
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 114 KTVDQYYYGSNNTIQKAGVQYILDSVIPRIWD 209
KT + + NN + AG++Y+ P W+
Sbjct: 152 KTYESFVEIQNNETKAAGIEYVEAHAAPTTWN 183
>AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.2 protein.
Length = 301
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 114 KTVDQYYYGSNNTIQKAGVQYILDSVIPRIWD 209
KT + + NN + AG++Y+ P W+
Sbjct: 152 KTYESFVEIQNNETKAAGIEYVEAHAAPTTWN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,528,091
Number of Sequences: 27780
Number of extensions: 158670
Number of successful extensions: 516
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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