Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B22
         (203 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   0.84 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   1.1  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   1.1  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   1.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   2.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   7.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    19   7.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   7.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   7.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 0.84
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 26  ADACFVCVATP 58
           A+A FVC+ATP
Sbjct: 189 AEAEFVCIATP 199


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 KYIREVSSLCFTPHNLIY 164
           KY R V  +CF   NL+Y
Sbjct: 406 KYSRIVFPVCFVCFNLMY 423


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 KYIREVSSLCFTPHNLIY 164
           KY R V  +CF   NL+Y
Sbjct: 406 KYSRIVFPVCFVCFNLMY 423


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 KYIREVSSLCFTPHNLIY 164
           KY R V  +CF   NL+Y
Sbjct: 344 KYSRIVFPVCFVCFNLMY 361


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 11  RARQGADACFVCVATPSNEYLIIDVVHLVC 100
           + +QG   C+VC      EY+  +   + C
Sbjct: 549 KKQQGDTCCWVCDQCEEYEYVYDEYTCMDC 578


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 11  RARQGADACFVCVATPSNEYL 73
           + +QG   C+VC      EY+
Sbjct: 459 KKQQGDTCCWVCDQCEEYEYV 479


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 139 HKELTSRIYLKAHTYEMYDI 80
           HK++ +R YL+  + +M ++
Sbjct: 262 HKQVLNRYYLERLSNDMGEV 281


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 27  RTHVLCVLPLHLTSILLSMS 86
           RTH+   L ++++ +LLS++
Sbjct: 130 RTHLRGTLTVNVSVLLLSLA 149


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 139 HKELTSRIYLKAHTYEMYDI 80
           HK++ +R YL+  + +M ++
Sbjct: 262 HKQVLNRYYLERLSNDMGEV 281


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 145 VKHKELTSRIYLKAHTYEMYDIDNKIL 65
           + HK LT         YEM+ I  K L
Sbjct: 248 IDHKMLTPIKSEPIDAYEMHQISKKKL 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,552
Number of Sequences: 438
Number of extensions: 861
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)