Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B21
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form ... 32 0.61
X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for ... 32 0.61
X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mR... 32 0.61
X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein. 32 0.61
M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte... 32 0.61
M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein. 32 0.61
BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein. 32 0.61
AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte ... 32 0.61
AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte ... 32 0.61
AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein. 32 0.61
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 29 7.5
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 29 7.5
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 29 7.5
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 29 7.5
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 29 7.5
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 29 7.5
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 29 7.5
>X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form
protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for
Leu-8 pan leukocyte antigen. ).
Length = 385
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mRNA
for leukocyte adhesion molecule-1. ).
Length = 372
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte
adhesion molecule-1 (LAM-1), exon 9. ).
Length = 372
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein.
Length = 375
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NDESCLAILNNFYSDGVKWHDVACHHVKPFVC 127
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 35 DESCLAILNNFYSDGVKWHDVACHHVKPFVCEDSDELLN 151
DE+C+ + YS+ W+D+ C + F+C+ + +N
Sbjct: 896 DENCVTM----YSNSGFWNDINCGYPNAFICQRHNSSIN 930
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,013,722
Number of Sequences: 237096
Number of extensions: 844363
Number of successful extensions: 1703
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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