Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B18
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 191 1e-49
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 191 1e-49
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 191 1e-49
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 191 1e-49
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 3e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 99 5e-22
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 99 5e-22
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 95 2e-20
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 6e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.004
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 36 0.010
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 36 0.010
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 36 0.010
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.031
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 33 0.071
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 33 0.071
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.12
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.12
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.22
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.22
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.88
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.88
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 2.7
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 4.7
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 6.2
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 8.2
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 8.2
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 191 bits (466), Expect = 1e-49
Identities = 88/90 (97%), Positives = 89/90 (98%)
Frame = +3
Query: 120 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 299
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 300 DKLKAERERGITIDIALWKFETGKYYVTII 389
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 191 bits (466), Expect = 1e-49
Identities = 88/90 (97%), Positives = 89/90 (98%)
Frame = +3
Query: 120 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 299
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 300 DKLKAERERGITIDIALWKFETGKYYVTII 389
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 191 bits (466), Expect = 1e-49
Identities = 88/90 (97%), Positives = 89/90 (98%)
Frame = +3
Query: 120 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 299
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 300 DKLKAERERGITIDIALWKFETGKYYVTII 389
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 191 bits (466), Expect = 1e-49
Identities = 88/90 (97%), Positives = 89/90 (98%)
Frame = +3
Query: 120 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 299
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 300 DKLKAERERGITIDIALWKFETGKYYVTII 389
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 3e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +3
Query: 120 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 299
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 300 DKLKAER 320
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 99 bits (238), Expect = 5e-22
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = +3
Query: 129 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 308
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 309 KAERERGITIDIALWKFETGKYYVTII 389
+ ERERG+T+DI FET + ++
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLL 253
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 99 bits (238), Expect = 5e-22
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = +3
Query: 129 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 308
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 309 KAERERGITIDIALWKFETGKYYVTII 389
+ ERERG+T+DI FET + ++
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLL 271
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 94.7 bits (225), Expect = 2e-20
Identities = 42/89 (47%), Positives = 62/89 (69%)
Frame = +3
Query: 123 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 302
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 303 KLKAERERGITIDIALWKFETGKYYVTII 389
ERE+G T+++ FET K + TI+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTIL 192
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 6e-04
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 324 RGITIDIALWKFETGKYYVTII 389
RGIT+ A + + + +I
Sbjct: 74 RGITVQSAAVNLDWKGHRINLI 95
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 324 RGITIDIA 347
RGITI A
Sbjct: 96 RGITIQSA 103
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 35.9 bits (79), Expect = 0.010
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 126 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 296
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 297 LDKLKAER 320
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.010
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 126 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 296
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 297 LDKLKAER 320
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.010
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 126 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 296
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 297 LDKLKAER 320
L+ A+R
Sbjct: 106 LEYETAKR 113
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.031
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 324 RGITI 338
RGIT+
Sbjct: 86 RGITV 90
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 33.1 bits (72), Expect = 0.071
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 305
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 306 LKAERERGITIDIALWKFET 365
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 33.1 bits (72), Expect = 0.071
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 305
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 306 LKAERERGITIDIALWKFET 365
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 99 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 206
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 99 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 206
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCG 215
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCG 215
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.88
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 222 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.88
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 222 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 141 INIVVIGHVDSGKSTTT 191
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 141 INIVVIGHVDSGKSTTT 191
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 291 WVLDKLKAERERGITIDIALWKFETGKYYVTII 389
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 291 WVLDKLKAERERGITIDIALWKFETGKYYVTII 389
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 291 WVLDKLKAERERGITIDIALWKFETGKYYVTII 389
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 389 DDGDIVFAGFELPESNIDGDTTLTLGL 309
+DGDIV + F+ P I D T++L L
Sbjct: 263 EDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 272
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 272
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 114 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 272
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 96 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC 212
+++R P+ ++ + + + V+G D GKST G L C
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGC 192
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 102 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 272
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 144 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 323
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 172 PASPQQLVT*STNAVVSTNVPSKSS 246
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,403,292
Number of Sequences: 27780
Number of extensions: 181806
Number of successful extensions: 547
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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