Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B16
         (205 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    25   7.4  
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z81514-8|CAB82214.1|  319|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AL031630-24|CAB82205.1|  319|Caenorhabditis elegans Hypothetical...    25   9.7  

>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 76  FIIVGLCVNYFNNIRNFEGTGYK 144
           F+++G+CV  F + R+ +  G K
Sbjct: 525 FVVIGICVQVFLDFRDIKRIGRK 547


>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
            F52G2.2a protein.
          Length = 1319

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = -2

Query: 129  FEISNIIKIINTQSH 85
            FEI+ +++I+NT++H
Sbjct: 979  FEITQVVEILNTENH 993


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
           protein F52G2.2b protein.
          Length = 1129

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = -2

Query: 129 FEISNIIKIINTQSH 85
           FEI+ +++I+NT++H
Sbjct: 789 FEITQVVEILNTENH 803


>Z81514-8|CAB82214.1|  319|Caenorhabditis elegans Hypothetical
           protein F26F2.1 protein.
          Length = 319

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 99  NTQSHNNKFDDH 64
           N+Q HN +FDDH
Sbjct: 210 NSQIHNQQFDDH 221


>AL031630-24|CAB82205.1|  319|Caenorhabditis elegans Hypothetical
           protein F26F2.1 protein.
          Length = 319

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 99  NTQSHNNKFDDH 64
           N+Q HN +FDDH
Sbjct: 210 NSQIHNQQFDDH 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,650,387
Number of Sequences: 27780
Number of extensions: 72385
Number of successful extensions: 185
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 12,740,198
effective HSP length: 47
effective length of database: 11,434,538
effective search space used: 228690760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)