Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B15
(216 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 1.3
Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium... 22 3.0
DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium c... 22 3.0
DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated sodi... 22 3.0
DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated sodi... 22 3.0
AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615650-1|AAU05107.1| 62|Anopheles gambiae sodium channel pro... 22 3.0
AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel pro... 22 3.0
AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel pro... 22 3.0
AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AY615571-1|AAU05028.1| 62|Anopheles gambiae sodium channel pro... 22 3.0
AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel pro... 22 3.0
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 22 3.0
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 21 3.9
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 21 6.9
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 20 9.1
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 20 9.1
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.0 bits (47), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 23 RAEISKIIKNE*RNSDDSYA*IYDQQIVGA 112
RAE+ K IK RNS I ++ + GA
Sbjct: 327 RAELGKAIKASKRNSFQELIDIAEENVFGA 356
>Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 136
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 61 FMHSFMIVFRV 71
>DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium
channel variant 1 protein.
Length = 78
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 15 FMHSFMIVFRV 25
>DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated
sodium channel protein.
Length = 66
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 9 FMHSFMIVFRV 19
>DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated
sodium channel protein.
Length = 66
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 9 FMHSFMIVFRV 19
>AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615650-1|AAU05107.1| 62|Anopheles gambiae sodium channel
protein.
Length = 62
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615571-1|AAU05028.1| 62|Anopheles gambiae sodium channel
protein.
Length = 62
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 18 FMHSFMIVFRV 28
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 63 FLHSFLIIFEI 31
F+HSF+I+F +
Sbjct: 976 FMHSFMIVFRV 986
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 43 YFRDFGSSNSQPG 5
YF+D G SNS G
Sbjct: 152 YFKDKGDSNSSAG 164
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 145 PGKPTVSKTEIREK 186
PGKP+++ +I+ K
Sbjct: 378 PGKPSIAHRDIKSK 391
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.1
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = -1
Query: 216 VWRHFVH 196
+W+HFVH
Sbjct: 345 LWKHFVH 351
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 7 RAVNWTSRNLENNQK 51
RAV W SR+ +++ K
Sbjct: 90 RAVRWFSRSFDHSAK 104
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,628
Number of Sequences: 2352
Number of extensions: 3563
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used: 9872082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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