Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B15
(216 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 47 1e-05
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 47 1e-05
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 47 1e-05
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 47 1e-05
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 47 1e-05
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 47 1e-05
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 47 1e-05
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 47 1e-05
BC104957-1|AAI04958.1| 655|Homo sapiens NLR family, pyrin domai... 29 2.7
AY489192-1|AAS67384.1| 655|Homo sapiens PYNOD protein. 29 2.7
AY154465-1|AAO18161.1| 655|Homo sapiens NALP10 protein. 29 2.7
AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens ... 29 2.7
AL627309-4|CAH72837.1| 290|Homo sapiens olfactory receptor, fam... 29 3.6
AB065964-1|BAC06176.1| 218|Homo sapiens seven transmembrane hel... 29 3.6
AB065944-1|BAC45264.1| 220|Homo sapiens seven transmembrane hel... 29 3.6
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 145 PGKPTVSKTEIREKLAKMYKVTPD 216
PGK TV KTEIREKLAKMYK TPD
Sbjct: 30 PGKATVPKTEIREKLAKMYKTTPD 53
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3
Query: 63 TATIRTRKFMTNRLLARKHDGXCDVLHSRK 152
T TIRTRKFMTNRLL RK DVLH K
Sbjct: 4 TVTIRTRKFMTNRLLQRK-QMVIDVLHPGK 32
>BC104957-1|AAI04958.1| 655|Homo sapiens NLR family, pyrin domain
containing 10 protein.
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 198 HFSELFTDLSFADGRFSWNARHRTYHRAC-APTICW 94
+FS FTD AD F ++ ++AC P ICW
Sbjct: 323 YFSSYFTDEKQADRAFDIVQKNDILYKACQVPGICW 358
>AY489192-1|AAS67384.1| 655|Homo sapiens PYNOD protein.
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 198 HFSELFTDLSFADGRFSWNARHRTYHRAC-APTICW 94
+FS FTD AD F ++ ++AC P ICW
Sbjct: 323 YFSSYFTDEKQADRAFDIVQKNDILYKACQVPGICW 358
>AY154465-1|AAO18161.1| 655|Homo sapiens NALP10 protein.
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 198 HFSELFTDLSFADGRFSWNARHRTYHRAC-APTICW 94
+FS FTD AD F ++ ++AC P ICW
Sbjct: 323 YFSSYFTDEKQADRAFDIVQKNDILYKACQVPGICW 358
>AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ32864 fis, clone TESTI2003625. ).
Length = 723
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 139 CIPGKPTVSKTEIREKLAKMYKV 207
CI G P V K+ I ++LAK YK+
Sbjct: 371 CILGPPAVGKSSIAKELAKYYKL 393
>AL627309-4|CAH72837.1| 290|Homo sapiens olfactory receptor, family
4, subfamily G, member8, apolipoprotein e receptor
protein.
Length = 290
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 130 HXPSCLRANNLLVINLRVRIVAVPSLIFDYFRD 32
H P + NL +I+L + VP LI+D F D
Sbjct: 34 HSPMYILLANLSLIDLSLSSTTVPRLIYDLFTD 66
>AB065964-1|BAC06176.1| 218|Homo sapiens seven transmembrane helix
receptor protein.
Length = 218
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 130 HXPSCLRANNLLVINLRVRIVAVPSLIFDYFRD 32
H P + NL +I+L + VP LI+D F D
Sbjct: 34 HSPMYILLANLSLIDLSLSSTTVPRLIYDLFTD 66
>AB065944-1|BAC45264.1| 220|Homo sapiens seven transmembrane helix
receptor protein.
Length = 220
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 130 HXPSCLRANNLLVINLRVRIVAVPSLIFDYFRD 32
H P + NL +I+L + VP LI+D F D
Sbjct: 34 HSPMYILLANLSLIDLSLSSTTVPRLIYDLFTD 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,780,993
Number of Sequences: 237096
Number of extensions: 480172
Number of successful extensions: 1202
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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