Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B14
(223 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyce... 75 2e-15
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 0.59
SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces... 24 2.4
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 24 2.4
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 23 4.1
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 23 5.5
SPBC25H2.02 |ths1||threonine-tRNA ligase Ths1 |Schizosaccharomyc... 23 5.5
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 23 7.2
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 23 7.2
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 23 7.2
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 23 7.2
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 23 7.2
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 22 9.5
SPAC13G7.11 |||mitochondrial inner membrane protein|Schizosaccha... 22 9.5
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 22 9.5
>SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 74.5 bits (175), Expect = 2e-15
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 29 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSK-MYVVCGGI 205
M+N+AG+ VDLY PRKCSA+NR+I AKDHASVQ+ + VD A GR K Y + G +
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVD-AEGRQIPGEKTTYAISGFV 59
Query: 206 RRMGES 223
R GES
Sbjct: 60 RSKGES 65
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 0.59
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 143 RPLSRAAPMRGPSHGSDDYSPSISLGS 63
+P R+ PS+ +D+ PS SLGS
Sbjct: 407 QPQGRSPNEHSPSNHPEDFPPSFSLGS 433
>SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 276
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 139 RYHELHRCVVLRMDQTITRRAFPWAVQVNEFTSVVLHFV 23
++HEL+RC+V +D P E S VL ++
Sbjct: 211 KFHELNRCIVQLIDDFNMVNFLPLESGNEESVSRVLSYI 249
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 83 ASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGGI 205
ASNR ++ S L A +DP TG+ + ++M ++ GI
Sbjct: 245 ASNRYLNHGQCDS--LWAARLDPVTGKVIEGTEMQIMLHGI 283
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 23.4 bits (48), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 151 RVHVRYHELHRCVVLRMDQTI 89
R+ + H+L +C+ + +DQ I
Sbjct: 129 RLPINLHKLEKCLTIPLDQNI 149
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/47 (23%), Positives = 21/47 (44%)
Frame = -2
Query: 159 PVAGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFCILCI 19
P+ G + + + +WS A + A H+ Y++ FC L +
Sbjct: 122 PMEGHQNEFQAVSSSWSDAELIASAASHYTQIYQAELFQKLFCRLAV 168
>SPBC25H2.02 |ths1||threonine-tRNA ligase Ths1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 703
Score = 23.0 bits (47), Expect = 5.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 90 LLAEHFLGQYKSTNSPASFCIL 25
+L EH+ G++ SP CI+
Sbjct: 582 ILTEHYAGKWPFWMSPRQVCII 603
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 194 RPRTSWRSQQHVRLQGPRP 138
RP SWR QH+ + P
Sbjct: 388 RPDLSWRDIQHITVYSASP 406
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 182 SWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLG 66
SW + +QG P+ ++ + PS S+ S + SLG
Sbjct: 76 SWSAIAKKHVQGDSPVKKSHSVPVPSDRSEKKSFNSSLG 114
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 176 RSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGS 63
RS H L + ++ +P GP+ + PS+S+ S
Sbjct: 59 RSTLHPLLSQQQQPAQQSPSLGPAQQNIQQPPSVSIAS 96
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 115 VVLRMDQTITRRAFPWAVQVNEFTSV 38
+VLR D ++ RR + W + +++ T +
Sbjct: 280 IVLRNDLSLNRRFYAWLMGLSKDTEL 305
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 107 SHGSDDYSPSISLGSTS 57
+HGS D P ++LGS S
Sbjct: 150 AHGSSDKLPYVALGSGS 166
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 115 VVLRMDQTITRRAFPWAVQVNEFTSVVLHFVYLS 14
++LR+DQ + W + V + + H YLS
Sbjct: 188 LMLRLDQLPGGKLLCWIIGVIFIAAFIAHVSYLS 221
>SPAC13G7.11 |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 269
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 206 ECLHRPRTSWRSQQHVRLQGPRPLSRA-APMRG 111
+ L++P+ W+ ++H+ LSRA A ++G
Sbjct: 147 QALNQPKCIWKLEKHISKPKLLNLSRAQADLKG 179
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 79 AFPWAVQVNEFTSVVLHF 26
A PW V N F SVVL F
Sbjct: 401 ASPWWVICNTFGSVVLIF 418
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,020,366
Number of Sequences: 5004
Number of extensions: 16608
Number of successful extensions: 58
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 2,362,478
effective HSP length: 53
effective length of database: 2,097,266
effective search space used: 41945320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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