Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B14
(223 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191 65 6e-12
03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095... 64 2e-11
11_01_0223 + 1746203-1746228,1746344-1746463,1746942-1747062,174... 29 0.38
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 29 0.67
01_06_1035 + 33964570-33964758,33965664-33965759,33965855-339659... 28 0.89
08_01_0955 + 9478018-9478773 28 1.2
01_01_0239 + 1983267-1984008,1984148-1984180,1984280-1985394 28 1.2
10_01_0236 + 2486371-2486952 27 2.0
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 2.0
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 27 2.0
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 27 2.0
01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008 27 2.0
01_06_0608 + 30575897-30576142,30576252-30576755 27 2.7
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 26 3.6
05_04_0199 + 18980017-18980759,18981478-18981532 26 3.6
04_04_0765 - 27910189-27912393,27912521-27912598 26 3.6
03_02_0972 - 12816807-12817016,12817099-12817215,12817963-128181... 26 3.6
11_06_0129 - 20397179-20397537,20397749-20400497 26 4.7
11_01_0798 + 7026509-7029272,7031573-7031994 26 4.7
09_06_0196 - 21481662-21481720,21481898-21483245 26 4.7
09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148 26 4.7
03_02_0052 + 5285061-5285106,5285711-5285754,5286317-5286539,528... 26 4.7
02_04_0300 + 21784634-21784691,21784784-21784893,21787486-217877... 26 4.7
01_05_0335 + 21074117-21074241,21074299-21074929,21075359-210753... 26 4.7
10_05_0097 + 9145478-9145777,9146590-9146785,9146949-9147193 25 6.2
08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773... 25 6.2
08_02_0934 + 22747742-22748644 25 6.2
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 25 6.2
06_01_0575 + 4062084-4063135,4063518-4063620 25 6.2
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 25 6.2
10_08_0620 - 19321612-19323237 25 8.3
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800 25 8.3
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 25 8.3
07_03_0605 + 19908541-19909605,19909703-19910092 25 8.3
07_01_1002 + 8463187-8463585 25 8.3
07_01_0975 + 8223269-8224354 25 8.3
06_01_1126 - 9277885-9277935,9278129-9278209,9278297-9278350,927... 25 8.3
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 25 8.3
>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
Length = 82
Score = 65.3 bits (152), Expect = 6e-12
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2
Query: 29 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGGIR 208
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 209 RMGES 223
G++
Sbjct: 60 AQGDA 64
>03_05_0610 -
26108546-26108671,26108739-26108789,26109410-26109542,
26109633-26109682
Length = 119
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +2
Query: 29 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGGIR 208
MQN+ G+ VDLY PRKCS +NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 209 RMGES 223
G++
Sbjct: 60 AQGDA 64
>11_01_0223 +
1746203-1746228,1746344-1746463,1746942-1747062,
1747441-1747572,1748266-1748375,1748465-1748648,
1749153-1749305,1749672-1749818
Length = 330
Score = 29.5 bits (63), Expect = 0.38
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 119 MRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 21
MR P+ G D P + LG HQ+ SA C+
Sbjct: 262 MREPAGGDDVSRPMLFLGEVMSHEHQKGSASCI 294
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 28.7 bits (61), Expect = 0.67
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 191 PRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPS 78
PR QH L PRP+S++APM S + SPS
Sbjct: 69 PRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPS 106
>01_06_1035 +
33964570-33964758,33965664-33965759,33965855-33965923,
33966644-33966748,33966852-33966908,33967065-33967265,
33967915-33968007,33968070-33968169,33968322-33968421,
33968869-33968954,33969294-33969403
Length = 401
Score = 28.3 bits (60), Expect = 0.89
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 164 HVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQR 51
H+ Q PL+RA P H SPS+ LGS + R
Sbjct: 6 HLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSR 43
>08_01_0955 + 9478018-9478773
Length = 251
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 219 SPILRMPPQTTYILEESAARPVAGSTSAITSCTDAWS 109
+P LR PP T A P AG+ S T+ AW+
Sbjct: 68 APTLRHPPAVTPSSATPATAPCAGAGSTTTAPPAAWT 104
>01_01_0239 + 1983267-1984008,1984148-1984180,1984280-1985394
Length = 629
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 80 SASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGGIRRMGES 223
S SNR ++ +L D P T A+SS MY GG G++
Sbjct: 121 SQSNRELYVLSRCRERLPPPDAVPVTNCRANSSGMYAYLGGSYGTGQT 168
>10_01_0236 + 2486371-2486952
Length = 193
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -3
Query: 200 LHRPRTSWRSQQHVRL-QGPRPLSRAAPMRGP---SHGSDDYSPSISLGSTSQRIH 45
+ +PRT + R Q RPL RAAP+ P + DD ++ G +H
Sbjct: 108 IKKPRTPRSGEGQARAPQRRRPLERAAPLPPPAAVAEALDDLEREVTRGFVEDLLH 163
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -1
Query: 178 GGVSSTSGCRVHVRYH-ELHRCVVLRMDQTIT---RRAFPWAVQVNEFTSVVL 32
GG SS+S V +H +H R ++ RRA PWA +E T VVL
Sbjct: 103 GGSSSSSTATARVPFHLPIHPPPPEREEEEEKKGIRRAVPWAAARDEETKVVL 155
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 218 LPSCECLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGP 108
L + E L++ SW Q+ RL+ P PL+ P + P
Sbjct: 228 LATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPP 264
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 195 QTTYILEESAARPVAGSTSAIT 130
Q T ILEE+ +P+ STSAIT
Sbjct: 510 QITNILEENVVQPLLVSTSAIT 531
>01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008
Length = 460
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -3
Query: 215 PSCECLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRR 36
P E H P+T WR H + G +S + PS S ++ + + +RR
Sbjct: 62 PKMETSHEPQTPWRLAVHPAVVGTVRVSGCGAVVAPSRRQCRVSAAVLTAAETATATRRR 121
>01_06_0608 + 30575897-30576142,30576252-30576755
Length = 249
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 49 IR*LVLPKEML---GE*SSDPCEGPRIGAARDSGRG 147
+R ++ KE L G SDPC+ RIGA D+GRG
Sbjct: 186 LRAMLAKKEELAAAGNNGSDPCKRRRIGA--DTGRG 219
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 82 GE*SSDPCEGPRIGAARDSGRGP-CNRT 162
G+ SS C G +RD+ GP CNRT
Sbjct: 89 GDLSSSDCAGCGTNVSRDAVAGPTCNRT 116
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 219 SPILRMPPQTTYILEESAARPVAGSTSAITSCT 121
+P+L PP + +AA P G+ +A+ T
Sbjct: 99 TPLLASPPAAAALASAAAAMPYLGAAAALAGAT 131
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 155 LQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKL 12
L GP P R GP+ ++ P + LGS H +A S L
Sbjct: 296 LGGPSPPLRLVDSAGPTCDLEESPPLVPLGSPPALAHAAHAATSFSPL 343
>03_02_0972 -
12816807-12817016,12817099-12817215,12817963-12818111,
12818192-12818405,12818505-12818666
Length = 283
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 92 RLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGG 202
RL HAK A +++ + V G++ D + +CGG
Sbjct: 209 RLKHAKRGALLEIYESKVVRVNGKSFDKTNKVTLCGG 245
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 153 AGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFC 31
AGS+S+ + D + + +L+ LG S NS + FC
Sbjct: 20 AGSSSSSNATADELALLSFKSMLSSPSLGLMASWNSSSHFC 60
>11_01_0798 + 7026509-7029272,7031573-7031994
Length = 1061
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 110 PSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKLHP 6
P HGSD SPS S T + + C KL P
Sbjct: 1024 PRHGSDQPSPSSSAPETGEESSPEKEPNCY-KLFP 1057
>09_06_0196 - 21481662-21481720,21481898-21483245
Length = 468
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 134 SRAAPMRGPSHGSDDYSPSISLGSTS 57
+R P++ HGS +PS++L ++S
Sbjct: 80 NRGTPVKDGGHGSSSSAPSLTLSNSS 105
>09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148
Length = 416
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 179 WRSQQHVRLQGPRPLSRAAPMRGPSHG 99
W+ H+RL RP S AAP+ P G
Sbjct: 20 WQLFNHIRLFALRPSSYAAPVWFPVRG 46
>03_02_0052 +
5285061-5285106,5285711-5285754,5286317-5286539,
5286664-5286827,5286918-5288144
Length = 567
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 202 ASTDHVHLGGVSSTSGC 152
A+ D +H GGV++ SGC
Sbjct: 122 AAGDFIHAGGVAAKSGC 138
>02_04_0300 +
21784634-21784691,21784784-21784893,21787486-21787771,
21788292-21788472,21788978-21789195,21789511-21789631,
21789703-21789800,21789894-21790105,21790199-21790311,
21790404-21790499,21790626-21790841,21790958-21791099,
21791280-21791525,21792078-21792389
Length = 802
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 160 TCC*LLQDVRGLWRHSQDGRV 222
TC LL D+RG+ R DG++
Sbjct: 687 TCGRLLNDIRGIEREESDGKM 707
>01_05_0335 +
21074117-21074241,21074299-21074929,21075359-21075399,
21078458-21078560,21078755-21079601,21079938-21080689,
21080712-21080970,21081011-21081354
Length = 1033
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 103 CEGPRIGAARDSGRGPCNRTCC*LLQDVRGLWRHSQDGR 219
C G I + D + P C Q VRG W H + GR
Sbjct: 90 CGGSNIVHSNDECKQPAQMWCG---QRVRGKWFHRESGR 125
>10_05_0097 + 9145478-9145777,9146590-9146785,9146949-9147193
Length = 246
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 194 RPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDY 87
R TS R Q R P P R+ R S G DDY
Sbjct: 7 RRSTSSRPSQRRRQCSPGPSRRSVDARQLSPGMDDY 42
>08_02_1410 -
26876243-26876497,26877129-26877239,26877240-26877324,
26877620-26877672,26878318-26878440,26878514-26878597,
26878708-26878773,26879512-26879584,26879854-26879888,
26879970-26880212
Length = 375
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 211 PANASTDHVHLGGVSSTSGCRVHVRYHELHRC 116
P +DHVH+ +S G + V Y + C
Sbjct: 299 PMGEESDHVHIIALSDALGVPIRVMYLDRSSC 330
>08_02_0934 + 22747742-22748644
Length = 300
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 101 GSDDYSPSISLGSTSQRIHQRRS 33
GS +SPS S S+S H+RR+
Sbjct: 264 GSTSFSPSTSSSSSSASPHERRA 286
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 59 LYCPRKCSASNRLIHAKDHASVQLVIADVDPA 154
+ C R +ASN K HAS ++DVD A
Sbjct: 158 ILCVRSGTASNPADSGKVHASHGFYVSDVDAA 189
>06_01_0575 + 4062084-4063135,4063518-4063620
Length = 384
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 116 RGPSHGSDDYSPSISLGSTS 57
RGP D SP++S+ STS
Sbjct: 291 RGPFRSGSDSSPAVSVASTS 310
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 194 RPRTSWRSQQHVRLQGPRPLSRAAPMRGPSH 102
R T W+ Q++ + +P + A RGP H
Sbjct: 419 RKNTPWQKAQNLNPKKEQPTTTALQKRGPLH 449
>10_08_0620 - 19321612-19323237
Length = 541
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 189 TYILEESAARPVAGSTSAIT 130
T ILEE+ +P+ STSA+T
Sbjct: 503 TNILEENVVQPLLVSTSAVT 522
>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
Length = 863
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 96 RRLLAEHFLGQYKSTN 49
RRL EHF YK TN
Sbjct: 574 RRLSLEHFASSYKKTN 589
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 201 PPQTTYILEESAARPVAGSTSAITSC 124
PP+TTY ++E VA + S + C
Sbjct: 1108 PPRTTYNIQEQHPHSVANNRSNMDPC 1133
>07_03_0605 + 19908541-19909605,19909703-19910092
Length = 484
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 6 RVELRYTKCRTTLVNSLTCTAQGNAR 83
RVE R +CRT ++ S+ G+A+
Sbjct: 63 RVEPRPAECRTAIIRSIEGNGHGHAQ 88
>07_01_1002 + 8463187-8463585
Length = 132
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 196 TDHVHLGGVSSTSGCRVHVRYHELHRCVVLRMDQTITR 83
T H HL V T+ R+H EL R R + + R
Sbjct: 10 TQHRHLPAVEGTAARRLHAVEAELGRSAPAREIEAVAR 47
>07_01_0975 + 8223269-8224354
Length = 361
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 152 QGPRPLSRAAPMRGPSHGSDDYSPSISLGST 60
+GP P A P GPS PS S S+
Sbjct: 313 EGPSPSGAAGPAEGPSSYGSTEGPSPSPSSS 343
>06_01_1126 -
9277885-9277935,9278129-9278209,9278297-9278350,
9278433-9278564,9278641-9278715,9279056-9279133,
9279215-9279327,9279421-9279535,9280565-9280754,
9281355-9281464,9281559-9281654,9281756-9281818,
9281911-9281988,9282452-9282564,9282664-9282721,
9282797-9282920,9282999-9283060,9283131-9283195,
9283264-9283324,9284242-9284307,9284472-9284531,
9284830-9284960,9285517-9285592,9285701-9285769,
9286065-9286112,9286552-9286671,9286918-9287034,
9287290-9287405,9288348-9288519,9289057-9289100,
9290359-9290712,9291680-9291806
Length = 1072
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 212 SCECLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPS 105
SC C H QQH+RLQ P P++ AP PS
Sbjct: 117 SCCCRHPVH-----QQHLRLQQPCPIN-TAPASMPS 146
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 175 GVSSTSGCRVHVRYHELHRC 116
G+ STS C V+ R+H H C
Sbjct: 345 GIVSTSFCYVNPRHHFSHLC 364
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,669,511
Number of Sequences: 37544
Number of extensions: 142425
Number of successful extensions: 610
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 53
effective length of database: 12,803,516
effective search space used: 256070320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -