Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B13
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 32 0.15
01_06_1518 + 37925609-37925871,37925954-37926554 31 0.34
02_02_0675 + 12845980-12846111,12846211-12846363,12846954-128471... 30 0.44
02_01_0017 - 112766-113650 30 0.59
08_02_0955 + 22994266-22995630 29 1.4
05_01_0274 - 2119122-2119775,2121457-2121570,2121895-2122203,212... 29 1.4
03_02_0992 + 13049871-13050449 29 1.4
02_04_0103 - 19768288-19768737 29 1.4
01_06_1570 + 38312319-38314259 29 1.4
06_01_0488 + 3467962-3468018,3468366-3468788 28 2.4
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 3.1
12_02_1209 - 27019724-27020040,27020690-27020945 27 4.1
07_03_0173 - 14721369-14721503,14722542-14722629,14723580-147237... 27 4.1
03_05_0590 - 25922905-25923008,25923637-25924594 27 4.1
10_07_0135 + 13308839-13308899,13310146-13310495,13310574-133107... 27 5.5
09_04_0379 - 17094540-17094868,17095354-17095717 27 5.5
08_02_0269 + 15087481-15087893,15087978-15088074,15089068-150891... 27 5.5
06_02_0177 + 12644270-12644581,12645717-12646054,12646291-12646489 27 5.5
04_04_0428 - 25149494-25149859 27 5.5
02_05_1127 + 34292894-34293284,34293948-34295443 27 5.5
01_06_0084 + 26286463-26288259 27 5.5
01_01_0060 + 477667-477816,479312-479722 27 5.5
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 26 7.2
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579... 26 7.2
07_03_1351 + 25959418-25959909 26 7.2
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 26 7.2
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 26 7.2
03_04_0029 - 16610182-16611753 26 7.2
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 26 7.2
02_02_0433 - 10178497-10178844,10180394-10180444,10181201-101812... 26 7.2
10_08_0774 + 20478203-20479393 26 9.6
09_04_0514 - 18236061-18237392 26 9.6
09_02_0519 - 10150954-10152006 26 9.6
09_02_0489 - 9847903-9848081,9848916-9849107,9849195-9849276,984... 26 9.6
06_01_0720 + 5248714-5248967,5250600-5251086 26 9.6
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 26 9.6
03_05_0547 + 25432079-25432356,25432446-25432522,25432685-254328... 26 9.6
02_02_0737 - 13529180-13529543,13530661-13531178 26 9.6
01_05_0454 + 22381302-22382642 26 9.6
01_01_0534 + 3920356-3920867,3921141-3922134 26 9.6
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 242 RHKPHHDVARSATTDPP--SAAITCTSLSDSSQKCGHGNAGGYTQRESCT 99
RHKP H A PP ++ ++CT S SS + G + SCT
Sbjct: 47 RHKPRHYTVAQAVHHPPWATSGVSCTISSGSSATSSCTISSGSSATSSCT 96
>01_06_1518 + 37925609-37925871,37925954-37926554
Length = 287
Score = 30.7 bits (66), Expect = 0.34
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 290 ASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQR 111
AS+ A S++ AP +H+ H+ V +A PS A S + + GH ++GG +
Sbjct: 145 ASTAAFPSLAPAPPPQQHRLHNPVHAAA----PSNASFARSAASPPSEDGHSSSGGSSDA 200
Query: 110 ESC 102
C
Sbjct: 201 PRC 203
>02_02_0675 +
12845980-12846111,12846211-12846363,12846954-12847100,
12847372-12847656
Length = 238
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 293 LASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTS 168
+A++C+ RSV++AP R V +T PPS + +S
Sbjct: 1 MAAACSFRSVARAPPPLRGLARRGVVHCCSTAPPSGGTSTSS 42
>02_01_0017 - 112766-113650
Length = 294
Score = 29.9 bits (64), Expect = 0.59
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 296 ILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAA 183
IL SS +S SQ+P+R P + TT+PP AA
Sbjct: 43 ILVSSAQSQSQSQSPTRIPPPPTPPPRPTTTTNPPCAA 80
>08_02_0955 + 22994266-22995630
Length = 454
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -1
Query: 269 SVSQAPSRARHK-PHHDVARSATTDPPSAAITCTSLSDS 156
S S +PSR+R K P H+ A ++T P SAA+ + SDS
Sbjct: 37 SRSASPSRSRSKTPPHNAAVLSST-PASAAVDFVAASDS 74
>05_01_0274 -
2119122-2119775,2121457-2121570,2121895-2122203,
2123743-2123904,2124046-2124129,2124315-2124500
Length = 502
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 224 DVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCRRA 78
+V+ S + P+AA T T L+ S G N GG Q + CR+A
Sbjct: 188 NVSPSLGSKRPAAAATLTRLTPESGSGGENNGGG-EQAPAAEMAPCRKA 235
>03_02_0992 + 13049871-13050449
Length = 192
Score = 28.7 bits (61), Expect = 1.4
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -1
Query: 332 RSYACSAPRSRLILASSCARRSVSQAPSRARHK-PHHDVARS-ATTDPPSAAITCTSLSD 159
RS P L LA S R P R R P + R A+T PP A T T L
Sbjct: 54 RSLPPPPPSPLLALAGSRIGRGGVLPPHRHRRSVPPPSLGRGVASTSPPLHAATVTPLRP 113
Query: 158 SSQKCGHGNAGGYTQ--RESCTRTVCRRAV 75
+ + G G + + + R VC V
Sbjct: 114 AGSRSGEGGSSRHCRFLHRRHRRRVCATTV 143
>02_04_0103 - 19768288-19768737
Length = 149
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 317 SAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDP 195
+APRSR+ S C RR S P DVA +AT +P
Sbjct: 49 AAPRSRM---SRCRRREPSPPPLPPTWHAREDVAAAATWEP 86
>01_06_1570 + 38312319-38314259
Length = 646
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 142 PHFCEESDSEVQVIAAEGGSVVAERATSWCGLWRALLGACETDLRAQLDA 291
P +C + Q +A G + V S CG A L C + L A +DA
Sbjct: 131 PSYCAGVTTAKQYVATVGNAAVLGSLNSSCGSDLADLSLCSSCLAAAIDA 180
>06_01_0488 + 3467962-3468018,3468366-3468788
Length = 159
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 269 SVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKC 144
+V PS + +P H A +A PP+AA+ T ++C
Sbjct: 119 AVVVGPSSCKQRPRHR-ALAAAPLPPNAAVASTEKKKGGERC 159
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 347 VESSRRSYACSAPRSRLILASSCARRSVSQAPSRARHKP 231
+E+ R+ P + +SS AR++ Q P R RH+P
Sbjct: 29 IETGTRNVT-HVPSKNVSTSSSQARKTTVQKPKRKRHRP 66
>12_02_1209 - 27019724-27020040,27020690-27020945
Length = 190
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 305 SRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAA 183
+RL A++ ARR A SRA VARSA SAA
Sbjct: 16 ARLAAAAAAARRDDEGASSRAASLAASRVARSARAAAASAA 56
>07_03_0173 -
14721369-14721503,14722542-14722629,14723580-14723752,
14727237-14727902
Length = 353
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -1
Query: 257 APSRARHKPHHDVARSATTDPPSAAIT---CTSLSDSSQKCGHGNA 129
A +R PH AR++T P+AA T D S GH +A
Sbjct: 2 AGARPFFSPHEAFARASTASSPAAAATVAVAAPAPDPSPATGHADA 47
>03_05_0590 - 25922905-25923008,25923637-25924594
Length = 353
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 275 RRSVSQAPSRARHKPHHDVARSATTDP 195
RR+ APS ARH+P A +A P
Sbjct: 172 RRNKDSAPSSARHEPSSAAAAAAMAKP 198
>10_07_0135 +
13308839-13308899,13310146-13310495,13310574-13310709,
13310806-13310942,13311041-13311164,13313393-13313871
Length = 428
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 350 RVESSRRSYACSAPRSRLILASSCARRSVSQAPSRARHKP 231
+V++ RRS + S PRS + + S R S S +P A P
Sbjct: 379 QVDTRRRSSSGSVPRSPMRMQPSPRRLSASASPLPAAGSP 418
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 175 QVIAAEGGSVVAERATS---WCGLWRALLGACETDLR 276
+V A G S+ E ATS W G+W A A DLR
Sbjct: 85 KVPARRGPSIAKEVATSDELWRGVWTAENAAASDDLR 121
>08_02_0269 + 15087481-15087893,15087978-15088074,15089068-15089112,
15089281-15089492,15090809-15090911,15091002-15091097,
15091405-15091473,15093341-15093588,15093640-15093759,
15093847-15094284,15094503-15094620,15095262-15095303,
15097099-15097161,15097365-15097475,15097730-15097801,
15097875-15097993,15099682-15099745,15100238-15101860
Length = 1350
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 314 APRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPP 192
AP SR S+ ARR P R R H R +T PP
Sbjct: 1174 APYSRRPDYSATARRGSPSYPRRRRRSRHFSSERDWSTVPP 1214
>06_02_0177 + 12644270-12644581,12645717-12646054,12646291-12646489
Length = 282
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 341 SSRRSYACSA-PRSRLILASSCARRSVSQAPSRAR-HKPHHDVARSATTDPPSAAIT 177
SS S A S R+ L+ CA S + APSR P A +A + PS+ IT
Sbjct: 2 SSSASRAASLLRRTSSALSRRCAHSSSAAAPSRPPVPLPRFRAAAAAASSSPSSGIT 58
>04_04_0428 - 25149494-25149859
Length = 121
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 314 APRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTD--PPSAAI-TCTSLSDSSQKC 144
A S L+ +++ RRS SQ +H ++RSA+ PP A + S D +QK
Sbjct: 60 AESSPLLCSAAAMRRSASQLQFANQHPLDPGMSRSASEKELPPCAGVPRSASWQDFAQKE 119
Query: 143 GH 138
H
Sbjct: 120 DH 121
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 344 ESSRR--SYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPS 189
E SRR + + S P + S +R S APSRA +P H + P S
Sbjct: 12 EDSRRRATTSTSTPTCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPAS 65
>01_06_0084 + 26286463-26288259
Length = 598
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = -1
Query: 344 ESSRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSL 165
++ RR A P + + S+ + ++ SR PH SA T +S+
Sbjct: 108 DAFRRMLAAGVPATDRNIPSAAKAVAAAEDSSRPPLAPHALHGLSAKTPFAGDVFVGSSV 167
Query: 164 SDSSQKCGH 138
D KCGH
Sbjct: 168 LDMYAKCGH 176
>01_01_0060 + 477667-477816,479312-479722
Length = 186
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 302 RLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSA 186
RL + C + S S P+ A + HH + S+++ PPS+
Sbjct: 11 RLHMKGLCLKLS-SLIPAAAPRRHHHHYSTSSSSSPPSS 48
>11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/62 (25%), Positives = 24/62 (38%)
Frame = -1
Query: 263 SQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCR 84
+QA R P + S P A + C S SD Q G+ G + + +C+
Sbjct: 1073 TQANKEERMHPSNVKIHSPAAHTPMANLLCDSFSDDWQLRSGGDTPGSVREAPKYKRLCK 1132
Query: 83 RA 78
A
Sbjct: 1133 YA 1134
>09_02_0207 -
5793848-5794276,5794523-5794645,5794742-5795250,
5795543-5795648,5795798-5795959,5796094-5796144,
5796229-5796394,5796624-5797093
Length = 671
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 260 QAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQ 114
+APSRA P D RS +++ PS + LS +++ G A TQ
Sbjct: 318 EAPSRATISPSTDNTRSTSSEDPS-NLRSQGLSKAAESKGSMGAFWSTQ 365
>07_03_1351 + 25959418-25959909
Length = 163
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 224 DVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRES 105
+ A + PS+A T L +S++ G G GGY + +S
Sbjct: 17 EAEEEAPSPRPSSAGCYTFLRSASRRGGAGGGGGYRRLDS 56
>06_01_0456 -
3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 308 RSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPP 192
RS+ + + R ++SQAP RA+ AR +T PP
Sbjct: 849 RSQAMRPQAVPRPTISQAPPRAQSPFLPATARPPSTPPP 887
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 154 EESDSEVQVIAAEGGSVVAERATSWCGLWRAL 249
E+ D +++ +G VVA + SWCG R +
Sbjct: 31 EDWDRKIEEANKDGKIVVANFSASWCGPCRVI 62
>03_04_0029 - 16610182-16611753
Length = 523
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 157 ESDSEVQVIAAEGGSVVAERATSWCGLWRAL 249
E DS V V+ +GGS E A LWR L
Sbjct: 388 ELDSGVGVVGGDGGSAAGEFAARLELLWRFL 418
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Frame = -1
Query: 275 RRSVSQAPSRARHKPHH-------DVARSATTDPPSAAIT 177
R++++ APS H PH A + T PPS A+T
Sbjct: 140 RQALTPAPSLVTHPPHSPSTPEKTQAATPSATQPPSPAVT 179
>02_02_0433 -
10178497-10178844,10180394-10180444,10181201-10181263,
10181427-10181471,10181772-10181816,10183894-10183923,
10184182-10184289,10186459-10186524,10186595-10186624,
10187147-10187501,10189323-10189345,10191421-10191447,
10192131-10192210,10192367-10192550
Length = 484
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 239 HKPHHDVARSATTDPPSAAITCTS 168
H PHH+ + + P S+ IT T+
Sbjct: 182 HHPHHNALQQQASSPRSSCITSTT 205
>10_08_0774 + 20478203-20479393
Length = 396
Score = 25.8 bits (54), Expect = 9.6
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -1
Query: 233 PHHDVARSATTDP-PSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCR 84
P D S+T P P A C S+ S G A GY S RTV R
Sbjct: 92 PLFDTNASSTFRPEPCGAAVCESIPTRSCAGDGGGACGYEASTSFGRTVGR 142
>09_04_0514 - 18236061-18237392
Length = 443
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -1
Query: 233 PHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGG 123
P DVARS SA ++C LSD G G
Sbjct: 132 PSGDVARSFRAHGGSAPVSCLELSDDGSLLVSGGYDG 168
>09_02_0519 - 10150954-10152006
Length = 350
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 221 VARSATTDPPSAAITCTSLSDSSQKCG---HGNAGG 123
+ARS++ PS++ +C S + G HG+AGG
Sbjct: 158 IARSSSMSHPSSSTSCRSSTPPWSLAGDTNHGSAGG 193
>09_02_0489 -
9847903-9848081,9848916-9849107,9849195-9849276,
9849529-9849722,9851009-9851601,9851827-9851870
Length = 427
Score = 25.8 bits (54), Expect = 9.6
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = -1
Query: 335 RRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDV-ARSATTDPPSAAITCTSLSD 159
RR +A A+ CA+R A R PHH + PPSA +
Sbjct: 107 RRRSPTAAANHASPAANGCAQRRSQGAYEVQRRPPHHIIHMHEGAPAPPSAHV--VDEEG 164
Query: 158 SSQKCGHGNAGGYTQRESCT 99
+ +A G+ QR CT
Sbjct: 165 RQEVSVEDDADGH-QRSKCT 183
>06_01_0720 + 5248714-5248967,5250600-5251086
Length = 246
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 269 SVSQAPSRARHKPHHDVARSATTDPPSAAITCT-SLSDSSQKCGHGNAGGYTQRESCTRT 93
SV + S+++ D A S+ T+ S+ C +L + G GY +RE C
Sbjct: 129 SVDKNKSQSKELSPVDDATSSPTNSTSSPTNCRKALYPAVVDSSPGKNRGYDERECCKNR 188
Query: 92 VC 87
C
Sbjct: 189 PC 190
>03_05_0890 - 28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 133 LPWPHFCEESDSEVQ 177
+PWPH EE SE Q
Sbjct: 1158 IPWPHVPEEMSSEAQ 1172
>03_05_0547 +
25432079-25432356,25432446-25432522,25432685-25432819,
25433516-25433570,25433696-25433783,25435040-25435138,
25435227-25435358
Length = 287
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 341 SSRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPP 192
S+ S + +APR +LAS A RS P RA V S PP
Sbjct: 12 STASSSSPAAPRHGRLLASPAAWRSARTLPPRAVASSRATVLVSNPPPPP 61
>02_02_0737 - 13529180-13529543,13530661-13531178
Length = 293
Score = 25.8 bits (54), Expect = 9.6
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 308 RSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNA 129
R R SS + + + APSR A S+T+ PP I + +S G
Sbjct: 96 RHRSTAPSSSSCQFQAAAPSRPPSALPSPTASSSTSSPPVDKIISRRIQVASMHHGQAIR 155
Query: 128 GGY--TQRESCTRTVCRRAV 75
G+ T++++C RR +
Sbjct: 156 RGHIITKQQACNMVNERRGL 175
>01_05_0454 + 22381302-22382642
Length = 446
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 112 RCVYPPALPWPHFCEESDSEVQVIAAEGG 198
RCV P LPWP ++S + V A GG
Sbjct: 164 RCVALPELPWPPAFDKS-GMLSVAAGGGG 191
>01_01_0534 + 3920356-3920867,3921141-3922134
Length = 501
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 115 CVYPPALPWPHFCEESDSEVQVI--AAEGGSVVAERATSW 228
C P + WPHF E+ +E V+ G V + T W
Sbjct: 391 CAGVPMITWPHFAEQFLNEKLVVDHLKIGMEVGVKGVTQW 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,764,478
Number of Sequences: 37544
Number of extensions: 108176
Number of successful extensions: 747
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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