Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B13
(350 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA... 29 1.3
AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p pro... 28 3.8
AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-P... 28 3.8
AF273707-2|AAL35410.1| 1041|Drosophila melanogaster PFTAIRE-inte... 27 6.7
AF145676-1|AAD38651.1| 869|Drosophila melanogaster BcDNA.GH1250... 27 6.7
AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB... 27 6.7
AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA... 27 6.7
U74488-1|AAB40125.1| 736|Drosophila melanogaster Barren protein. 27 8.9
BT011474-1|AAR99132.1| 735|Drosophila melanogaster RE15383p pro... 27 8.9
BT011446-1|AAR99104.1| 735|Drosophila melanogaster RE48802p pro... 27 8.9
AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p pro... 27 8.9
AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1 homeodo... 27 8.9
AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB... 27 8.9
AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA... 27 8.9
AE014134-3190|AAN11061.1| 735|Drosophila melanogaster CG10726-P... 27 8.9
AE014134-3189|AAF53866.1| 735|Drosophila melanogaster CG10726-P... 27 8.9
>AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA
protein.
Length = 1393
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = -1
Query: 341 SSRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSAT---TDPPSAAITCT 171
SS S PR L +++ + P A+H PH + + T PPS+ T
Sbjct: 1053 SSSESDPVPEPRYTLEGKYCPFKKTYAVEPQNAQHIPHEESEQGEDCRKTPPPSSHSTEE 1112
Query: 170 SLSDSSQKCGHGNAGGYTQRESCTRTVCRR 81
+ SD + G G CTRT +R
Sbjct: 1113 AESDEERARGGGGNPSGIGMTYCTRTGKKR 1142
>AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p
protein.
Length = 709
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 178 VIAAEGGSVVAERATSWCGLWRALLG 255
+IAA GSV+ +R W GL LLG
Sbjct: 274 IIAAIFGSVIGDRDLRWLGLKNELLG 299
>AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-PA
protein.
Length = 709
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 178 VIAAEGGSVVAERATSWCGLWRALLG 255
+IAA GSV+ +R W GL LLG
Sbjct: 274 IIAAIFGSVIGDRDLRWLGLKNELLG 299
>AF273707-2|AAL35410.1| 1041|Drosophila melanogaster
PFTAIRE-interacting factor 1B protein.
Length = 1041
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 RSATTDPPSA-AITCTSLSDSSQKCGHGNAGGYTQRESCTR 96
RS + DPP+ A TC +D S CG G+ + R+ C++
Sbjct: 84 RSKSADPPAVKAHTCACNTDPS-PCGLGHQEKSSSRKPCSQ 123
>AF145676-1|AAD38651.1| 869|Drosophila melanogaster BcDNA.GH12504
protein.
Length = 869
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 RSATTDPPSA-AITCTSLSDSSQKCGHGNAGGYTQRESCTR 96
RS + DPP+ A TC +D S CG G+ + R+ C++
Sbjct: 84 RSKSADPPAVKAHTCACNTDPS-PCGLGHQEKSSSRKPCSQ 123
>AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB,
isoform B protein.
Length = 1041
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 RSATTDPPSA-AITCTSLSDSSQKCGHGNAGGYTQRESCTR 96
RS + DPP+ A TC +D S CG G+ + R+ C++
Sbjct: 84 RSKSADPPAVKAHTCACNTDPS-PCGLGHQEKSSSRKPCSQ 123
>AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA,
isoform A protein.
Length = 1041
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 RSATTDPPSA-AITCTSLSDSSQKCGHGNAGGYTQRESCTR 96
RS + DPP+ A TC +D S CG G+ + R+ C++
Sbjct: 84 RSKSADPPAVKAHTCACNTDPS-PCGLGHQEKSSSRKPCSQ 123
>U74488-1|AAB40125.1| 736|Drosophila melanogaster Barren protein.
Length = 736
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 348 GRVESQELRVQRAAESTHPRVELRAQ 271
G+V++Q +R QRA +S H RA+
Sbjct: 441 GQVDTQPIRTQRAKKSAHLNANRRAK 466
>BT011474-1|AAR99132.1| 735|Drosophila melanogaster RE15383p
protein.
Length = 735
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 348 GRVESQELRVQRAAESTHPRVELRAQ 271
G+V++Q +R QRA +S H RA+
Sbjct: 440 GQVDTQPIRTQRAKKSAHLNANRRAK 465
>BT011446-1|AAR99104.1| 735|Drosophila melanogaster RE48802p
protein.
Length = 735
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 348 GRVESQELRVQRAAESTHPRVELRAQ 271
G+V++Q +R QRA +S H RA+
Sbjct: 440 GQVDTQPIRTQRAKKSAHLNANRRAK 465
>AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p
protein.
Length = 961
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -1
Query: 338 SRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAI 180
SR+ Y+ S SR SS RRS S++PS R + + TT PP A +
Sbjct: 511 SRKRYSYS---SRSSSGSSYRRRSRSRSPSNRRSR-----VKKKTTPPPVATV 555
>AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1
homeodomain protein protein.
Length = 513
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 269 SVSQAPSRARHKPHHDVARSATTDPP-SAAITCTSLSDSSQKCGHGNAGGYTQ 114
S S A H HD + S + P S+ + +SLS G GGY+Q
Sbjct: 103 STSGAEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQ 155
>AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB,
isoform B protein.
Length = 715
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -1
Query: 338 SRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAI 180
SR+ Y+ S SR SS RRS S++PS R + + TT PP A +
Sbjct: 511 SRKRYSYS---SRSSSGSSYRRRSRSRSPSNRRSR-----VKKKTTPPPVATV 555
>AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA,
isoform A protein.
Length = 961
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -1
Query: 338 SRRSYACSAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAI 180
SR+ Y+ S SR SS RRS S++PS R + + TT PP A +
Sbjct: 511 SRKRYSYS---SRSSSGSSYRRRSRSRSPSNRRSR-----VKKKTTPPPVATV 555
>AE014134-3190|AAN11061.1| 735|Drosophila melanogaster CG10726-PB,
isoform B protein.
Length = 735
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 348 GRVESQELRVQRAAESTHPRVELRAQ 271
G+V++Q +R QRA +S H RA+
Sbjct: 440 GQVDTQPIRTQRAKKSAHLNANRRAK 465
>AE014134-3189|AAF53866.1| 735|Drosophila melanogaster CG10726-PA,
isoform A protein.
Length = 735
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 348 GRVESQELRVQRAAESTHPRVELRAQ 271
G+V++Q +R QRA +S H RA+
Sbjct: 440 GQVDTQPIRTQRAKKSAHLNANRRAK 465
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,555,919
Number of Sequences: 53049
Number of extensions: 160273
Number of successful extensions: 946
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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