Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B13
         (350 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   1.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   5.6  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 220 TSWCGLWRAL 249
           T WC +WR+L
Sbjct: 116 TDWCDVWRSL 125


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -1

Query: 290 ASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNA 129
           A+  A R  S+A S     P       ATT  P+A+ T T  +  S      NA
Sbjct: 197 ANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNA 250


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
 Frame = -1

Query: 281 CARRSVSQAPSRAR-HKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRES 105
           CA R +     RA+ H   H       T      +T     +S  + GHG+      R S
Sbjct: 227 CAARRIVLEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQLNSDVQPGHGSPPVKQHRSS 286

Query: 104 CTRTVC 87
              T C
Sbjct: 287 SASTTC 292


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -1

Query: 251  SRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYT 117
            S  +H PHH +  S +    +  ++  S+  S+Q     +A   T
Sbjct: 913  SNQQHFPHHQIQVSTSAGLQTIRLSGHSVLHSAQSVVASSASNVT 957


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 12/50 (24%), Positives = 18/50 (36%)
 Frame = +1

Query: 118 VYPPALPWPHFCEESDSEVQVIAAEGGSVVAERATSWCGLWRALLGACET 267
           ++ P  P P  CE ++    V+ +  GS            WR    A  T
Sbjct: 228 IFVPVKPCPWICELTNDAGYVVYSALGSFYIPMLVMLFFYWRIYNAAVST 277



 Score = 20.2 bits (40), Expect = 7.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 329 SYACSAPRSRLILASSCARRSVSQAPSR 246
           S  C  PRS  +  S   R   ++ PSR
Sbjct: 379 SQLCPTPRSTHLKVSGINRVGSTRRPSR 406


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 245 ARHKPHHDVARSATTDP 195
           ARH PH  V  S  T P
Sbjct: 424 ARHIPHASVTDSENTVP 440


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,773
Number of Sequences: 438
Number of extensions: 790
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)