Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B12
(319 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 164 4e-41
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 164 4e-41
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 164 4e-41
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 164 4e-41
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 64 1e-10
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 29 3.0
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 29 3.0
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 29 3.0
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 29 3.0
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 29 3.0
BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271... 28 5.2
AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-indu... 28 5.2
AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp ... 28 5.2
BC038232-1|AAH38232.1| 826|Homo sapiens Unknown (protein for IM... 27 9.1
BC016832-1|AAH16832.1| 444|Homo sapiens cerebral cavernous malf... 27 9.1
BC008859-1|AAH08859.1| 444|Homo sapiens cerebral cavernous malf... 27 9.1
BC004903-1|AAH04903.1| 444|Homo sapiens cerebral cavernous malf... 27 9.1
AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein. 27 9.1
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 164 bits (399), Expect = 4e-41
Identities = 75/102 (73%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +1
Query: 16 QTECSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAVEGTYIDKRCPFTG 192
QTE ++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EA+EGTYIDK+CPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 193 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 106
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +1
Query: 226 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 318
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRH 31
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 146 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 39
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 121 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 157
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 146 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 39
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 69 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 105
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 146 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 39
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 146 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 39
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 146 SRGVLKPRPTS-LWYLRGLRLRFTPMPFLRFKKTVGC 39
+ G+L RP ++Y+ G FTP P LRF GC
Sbjct: 813 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 849
>BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271
protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 218 RIRPRMDTL-PVNGHLLSMYVPSTASRGVLKPRPTSLWYLRGLRLRFTPMPFLRFKK 51
++ R+ TL + G L + S G L R SL+Y+RG L P+P + K
Sbjct: 33 KVSVRIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-induced
zinc finger protein protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 218 RIRPRMDTL-PVNGHLLSMYVPSTASRGVLKPRPTSLWYLRGLRLRFTPMPFLRFKK 51
++ R+ TL + G L + S G L R SL+Y+RG L P+P + K
Sbjct: 33 KVSVRIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp
protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 218 RIRPRMDTL-PVNGHLLSMYVPSTASRGVLKPRPTSLWYLRGLRLRFTPMPFLRFKK 51
++ R+ TL + G L + S G L R SL+Y+RG L P+P + K
Sbjct: 33 KVSVRIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>BC038232-1|AAH38232.1| 826|Homo sapiens Unknown (protein for
IMAGE:5741123) protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 43 PTVFLNRKKGIGVKRSRKPLRYHK 114
P+VF+ +K +KRS KP R H+
Sbjct: 459 PSVFIEPRKSSRIKRSPKPRRKHQ 482
>BC016832-1|AAH16832.1| 444|Homo sapiens cerebral cavernous
malformation 2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 240 HFLNNACQDTASDGHVTREWTSLINVCAFN 151
HF++NA + GH+T+E +++++ A+N
Sbjct: 90 HFIDNAKRAHQLPGHLTQEHDAVLSLSAYN 119
>BC008859-1|AAH08859.1| 444|Homo sapiens cerebral cavernous
malformation 2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 240 HFLNNACQDTASDGHVTREWTSLINVCAFN 151
HF++NA + GH+T+E +++++ A+N
Sbjct: 90 HFIDNAKRAHQLPGHLTQEHDAVLSLSAYN 119
>BC004903-1|AAH04903.1| 444|Homo sapiens cerebral cavernous
malformation 2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 240 HFLNNACQDTASDGHVTREWTSLINVCAFN 151
HF++NA + GH+T+E +++++ A+N
Sbjct: 90 HFIDNAKRAHQLPGHLTQEHDAVLSLSAYN 119
>AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein.
Length = 1865
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 43 PTVFLNRKKGIGVKRSRKPLRYHK 114
P+VF+ +K +KRS KP R H+
Sbjct: 1514 PSVFIEPRKSSRIKRSPKPRRKHQ 1537
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,941,563
Number of Sequences: 237096
Number of extensions: 1015471
Number of successful extensions: 1924
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1915
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -