Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B10
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    77   1e-16
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   2.1  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    22   6.4  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            21   8.4  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 77.4 bits (182), Expect = 1e-16
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = +1

Query: 187 LFENRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRL 318
           LFE R KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RL
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRL 80


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 117 DREKSSGRSTCGEES*AQEDCKPS 188
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein
          RS11 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 39 GHVSIRGR*IT 71
          GH+SIRGR +T
Sbjct: 59 GHISIRGRILT 69


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 232 QPTRDLSRFVRWPKYIRIQRQKAV 303
           +PTR L  F RW   +   R   V
Sbjct: 465 EPTRHLDIFKRWKSILASSRTDTV 488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,604
Number of Sequences: 2352
Number of extensions: 4313
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)