Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B09
(431 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 135 4e-31
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 126 2e-28
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 122 3e-27
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 116 2e-25
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 110 1e-23
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 104 9e-22
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 102 3e-21
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 95 7e-19
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 93 2e-18
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 88 6e-17
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 84 1e-15
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 79 5e-14
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 73 3e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 73 3e-12
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 73 3e-12
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 66 4e-10
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 61 1e-08
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 48 1e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 37 0.21
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 34 1.5
UniRef50_Q57U40 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 2.6
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 3.4
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 32 5.9
UniRef50_Q7QTK6 Cluster: GLP_375_15131_16318; n=1; Giardia lambl... 31 7.8
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 31 7.8
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 135 bits (326), Expect = 4e-31
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 126 bits (304), Expect = 2e-28
Identities = 59/98 (60%), Positives = 79/98 (80%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR
Sbjct: 2 YRFLARRTNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVR 61
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
++ +PK+ + AL VT +ARARI+ AGGE++T DQLAL+
Sbjct: 62 IHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQ 99
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 122 bits (294), Expect = 3e-27
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+L RRT++ FN +IL+RLFMS++NRPP+SLSRL ++M+ +EG I VVVG V++D+R
Sbjct: 30 YRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQG--KEGKIGVVVGAVTDDIR 87
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
+Y VP + V AL TE ARARI AGGE LT DQLALR
Sbjct: 88 VYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 116 bits (280), Expect = 2e-25
Identities = 60/130 (46%), Positives = 87/130 (66%)
Frame = +1
Query: 10 GYRHQS*TRQESSAHRS*VSGCVLENXIV*NWYRYLARRTNAKFNQIILRRLFMSRINRP 189
G H S + + S HR+ + ++ Y +LARRT+A FN+++L+ LF+S+INRP
Sbjct: 2 GIDHTS-KQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 190 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 369
P+S+SR+AR +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 370 MLTCDQLALR 399
+T DQLA+R
Sbjct: 121 CITLDQLAVR 130
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 110 bits (264), Expect = 1e-23
Identities = 55/98 (56%), Positives = 75/98 (76%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y++L+RRT+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R
Sbjct: 33 YKFLSRRTDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDER 90
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
+ VPK++V AL VTE AR RILA+GGE+LT DQL R
Sbjct: 91 MDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVAR 128
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 104 bits (249), Expect = 9e-22
Identities = 53/98 (54%), Positives = 70/98 (71%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRT+ FN+II +RL M + RPP+SLS+L +HM + +AVVVG++++D R
Sbjct: 89 YRFLARRTDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKR 146
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
L++ M V AL TE AR RI+ AGGE LT DQLALR
Sbjct: 147 LFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALR 184
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 102 bits (245), Expect = 3e-21
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y++LARRT+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D R
Sbjct: 248 YKFLARRTDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDAR 307
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLA 393
L TVPK+ V AL TE AR RILAAGG+ LT DQLA
Sbjct: 308 LLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLA 343
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 94.7 bits (225), Expect = 7e-19
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGT 267
Y++LA+RT++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG
Sbjct: 33 YKFLAKRTSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGD 92
Query: 268 VSNDVRLYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
V +DVR+ +P M V AL ++ AR I+AAGGE LT DQLA+
Sbjct: 93 VLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAM 135
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 93.5 bits (222), Expect = 2e-18
Identities = 52/96 (54%), Positives = 66/96 (68%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y++LARRT++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVR
Sbjct: 328 YKFLARRTDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVR 387
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLA 393
L TVPK+ V TE AR RILAAGG+ LT DQLA
Sbjct: 388 LLTVPKIKV----FTETARKRILAAGGKTLTFDQLA 419
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 88.2 bits (209), Expect = 6e-17
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y +LARRT +KF + IL RL +SR+NRP +S S+LA MKK E AV V TV+ D R
Sbjct: 32 YGFLARRTQSKFAKTILHRLCLSRVNRPIVSTSKLACLMKKHPEE--TAVCVNTVTYDSR 89
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
Y VPKM V AL T+ A A I AGG+ L D+LAL+
Sbjct: 90 -YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALK 126
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 83.8 bits (198), Expect = 1e-15
Identities = 43/97 (44%), Positives = 63/97 (64%)
Frame = +1
Query: 100 NWYRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSND 279
N ++ + T F +++ +RL +S+ NRP +S+SRLA M K RE IAVV TV+ND
Sbjct: 31 NAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLMHK--REDKIAVVASTVTND 88
Query: 280 VRLYTVPKMTVAALHVTEKARARILAAGGEMLTCDQL 390
RL T+P+MT+ AL + AR+RI AGG ++ D+L
Sbjct: 89 ERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDEL 125
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 78.6 bits (185), Expect = 5e-14
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = +1
Query: 181 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 360
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 361 GGEMLTCDQLAL 396
GG+ LT DQLAL
Sbjct: 153 GGKNLTFDQLAL 164
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +1
Query: 187 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGG 366
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 367 EMLTCDQLAL 396
++L+ DQLA+
Sbjct: 107 KILSFDQLAM 116
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y +L R+T +KFN + L+R FMS++N+ P+ LSRL R M ++G I VV+G+V++D+R
Sbjct: 33 YHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGSVTDDLR 90
Query: 286 LYTVPKMTVAALHVTEKARARI 351
+Y V + V L T++ R I
Sbjct: 91 VYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y +L R+T +KFN + L+R FMS++N+ P+ LSRL R M ++G I VV+G+V++D+R
Sbjct: 33 YHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGSVTDDLR 90
Query: 286 LYTVPKMTVAALHVTEKARARI 351
+Y V + V L T++ R I
Sbjct: 91 VYEVLYLKVTILRFTKRVREGI 112
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 65.7 bits (153), Expect = 4e-10
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
+++LARRT+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++
Sbjct: 33 FKFLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTES 90
Query: 286 LYTVPKMTVAALHVT 330
L +P TV + VT
Sbjct: 91 LGMIPSTTVTLVLVT 105
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +1
Query: 274 NDVRLYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
+D R+ VPK++V AL VTE AR RILA+GGE+LT DQL R
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVAR 166
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 60.9 bits (141), Expect = 1e-08
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRL 210
YR+LARRTN+ FN+++L+RLFMSR NRPP++LSR+
Sbjct: 141 YRFLARRTNSSFNKVVLKRLFMSRTNRPPLALSRM 175
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 2 HEVGIDINHKHDRKVRRTEVKSQDVYLR 85
H +G+DI H DRKVRR E KSQD+YLR
Sbjct: 108 HGLGVDIRHNKDRKVRRKEPKSQDIYLR 135
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/85 (29%), Positives = 48/85 (56%)
Frame = +1
Query: 136 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 315
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 316 ALHVTEKARARILAAGGEMLTCDQL 390
AL+ + + +I+ GG++ +++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEI 149
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 36.7 bits (81), Expect = 0.21
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +1
Query: 109 RYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRL 288
R AR +A +++ + R R +++ +L R K EG + VV G + +L
Sbjct: 21 RKAARANSASIWRVVAEFVEKPRRQRVIVNVGKLNRVAK----EGDVVVVPGKLLAGGQL 76
Query: 289 YTVPKMTVAALHVTEKARARILAAGGEMLTCDQL 390
K+ VAA+ ++ KA +++ AGGE+LT +L
Sbjct: 77 NK--KIIVAAVKISPKAARKVIEAGGEVLTIPEL 108
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 33.9 bits (74), Expect = 1.5
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 142 NQIILRRLFMSRINRPPISLSRL-ARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAA 318
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKL--AHKITVAA 82
Query: 319 LHVTEKARARILAAGGEMLTCDQL 390
+E A+ + AGG +T +L
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKEL 106
>UniRef50_Q57U40 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 739
Score = 33.5 bits (73), Expect = 1.9
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = -1
Query: 401 HRRANWSHVSISPPAAKMRARAFSVTCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFF 222
HR++ S+ ISP + +R F+ SA V L + SL+ T+I+PS V
Sbjct: 2 HRKSIVSNYFISPEYSVAGSRVFTPNASAEEVTLSDAPTQLSLQITSPKTSIRPSAVSSL 61
Query: 221 MWRAKRD 201
++ R+
Sbjct: 62 RFKRGRE 68
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 2.6
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 208 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 321
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 3.4
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +1
Query: 136 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 291
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 292 TVPKMTVAALH 324
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 3.4
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 232 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 354
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 31.9 bits (69), Expect = 5.9
Identities = 30/91 (32%), Positives = 46/91 (50%)
Frame = +1
Query: 118 ARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTV 297
+R T A + + RL SR N +LSRL+R + + ++G S DV +
Sbjct: 23 SRSTGAALWRDVALRLETSRSNWAEPNLSRLSRTAGEDETILVPGKLLG--SGDV----I 76
Query: 298 PKMTVAALHVTEKARARILAAGGEMLTCDQL 390
+VAA V+ AR++I AAGG ++T L
Sbjct: 77 GSPSVAAYSVSAGARSKIEAAGGRVMTIRDL 107
>UniRef50_Q7QTK6 Cluster: GLP_375_15131_16318; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_375_15131_16318 - Giardia lamblia
ATCC 50803
Length = 395
Score = 31.5 bits (68), Expect = 7.8
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +1
Query: 226 KPT--REGLIAVVVGTVS----NDVRLYTVPKMTVAALHVTEKARARILAAGGEMLTC 381
+PT ++GL+AV V V+ +DVR+ VP+ A V RAR+ A G+ + C
Sbjct: 121 RPTQAKDGLVAVAVARVAPAGKDDVRVDVVPEAVEAVDAVPGVRRARVNLAKGDCVAC 178
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 31.5 bits (68), Expect = 7.8
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +1
Query: 118 ARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTV 297
++ NA + + RL S ++LS +AR+ +V G V ++ L
Sbjct: 23 SKTENAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDL--T 76
Query: 298 PKMTVAALHVTEKARARILAAGGEMLTCDQL 390
K+ VAA ++KA+ +I +AGGE ++ D +
Sbjct: 77 EKVNVAAFKFSQKAQEKIESAGGECVSIDDI 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,107,842
Number of Sequences: 1657284
Number of extensions: 8032725
Number of successful extensions: 20029
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20013
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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