Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B09
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 135 7e-32
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 135 7e-32
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 135 7e-32
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 135 7e-32
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 135 7e-32
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 133 3e-31
BC114491-1|AAI14492.1| 1189|Homo sapiens NEK1 protein protein. 30 3.9
BC063885-1|AAH63885.1| 708|Homo sapiens NIMA (never in mitosis ... 30 3.9
BC015147-1|AAH15147.1| 403|Homo sapiens Unknown (protein for IM... 30 3.9
AL139082-5|CAI12892.2| 708|Homo sapiens NIMA (never in mitosis ... 30 3.9
AB067488-1|BAB67794.1| 1265|Homo sapiens KIAA1901 protein protein. 30 3.9
BC033037-1|AAH33037.1| 461|Homo sapiens C9orf43 protein protein. 29 9.0
BC026884-1|AAH26884.1| 461|Homo sapiens chromosome 9 open readi... 29 9.0
AL137066-6|CAH70101.1| 461|Homo sapiens chromosome 9 open readi... 29 9.0
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 135 bits (326), Expect = 7e-32
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 3e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 135 bits (326), Expect = 7e-32
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 9 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 68
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 69 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 105
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 135 bits (326), Expect = 7e-32
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 3e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 135 bits (326), Expect = 7e-32
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 3e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 135 bits (326), Expect = 7e-32
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 3e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 133 bits (321), Expect = 3e-31
Identities = 63/97 (64%), Positives = 79/97 (81%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
YR+LARRTN+ FNQ++L+RLFMSR NRPP+ LSR+ R MK P RE AVVVGT+++DVR
Sbjct: 32 YRFLARRTNSTFNQVVLKRLFMSRTNRPPLCLSRMIRKMKLPGRENKTAVVVGTITDDVR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLAL 396
+ VPK+ V AL VT +AR+RIL AGG++LT DQLAL
Sbjct: 92 VQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
Score = 43.6 bits (98), Expect = 3e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+G+DI H DRKVRR E KSQD+YLR
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLR 26
>BC114491-1|AAI14492.1| 1189|Homo sapiens NEK1 protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 3.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 5 EVGIDINHKHDRKVRRTEVKSQDVYL 82
++ + + H HDRK+ ++KSQ+++L
Sbjct: 111 QICLALKHVHDRKILHRDIKSQNIFL 136
>BC063885-1|AAH63885.1| 708|Homo sapiens NIMA (never in mitosis
gene a)-related kinase 5 protein.
Length = 708
Score = 29.9 bits (64), Expect = 3.9
Identities = 8/26 (30%), Positives = 19/26 (73%)
Frame = +2
Query: 5 EVGIDINHKHDRKVRRTEVKSQDVYL 82
++ + + H HDRK+ ++K+Q+++L
Sbjct: 111 QISLGLKHIHDRKILHRDIKAQNIFL 136
>BC015147-1|AAH15147.1| 403|Homo sapiens Unknown (protein for
IMAGE:4063881) protein.
Length = 403
Score = 29.9 bits (64), Expect = 3.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 5 EVGIDINHKHDRKVRRTEVKSQDVYL 82
++ + + H HDRK+ ++KSQ+++L
Sbjct: 111 QICLALKHVHDRKILHRDIKSQNIFL 136
>AL139082-5|CAI12892.2| 708|Homo sapiens NIMA (never in mitosis
gene a)-related kinase 5 protein.
Length = 708
Score = 29.9 bits (64), Expect = 3.9
Identities = 8/26 (30%), Positives = 19/26 (73%)
Frame = +2
Query: 5 EVGIDINHKHDRKVRRTEVKSQDVYL 82
++ + + H HDRK+ ++K+Q+++L
Sbjct: 111 QISLGLKHIHDRKILHRDIKAQNIFL 136
>AB067488-1|BAB67794.1| 1265|Homo sapiens KIAA1901 protein protein.
Length = 1265
Score = 29.9 bits (64), Expect = 3.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 5 EVGIDINHKHDRKVRRTEVKSQDVYL 82
++ + + H HDRK+ ++KSQ+++L
Sbjct: 118 QICLALKHVHDRKILHRDIKSQNIFL 143
>BC033037-1|AAH33037.1| 461|Homo sapiens C9orf43 protein protein.
Length = 461
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 292 CKASHHWRLCQRLQRSNPRV*ASSCGVP 209
C+ W +R++R +PR+ SSC P
Sbjct: 19 CQHPQCWATIRRIERGHPRILGSSCKTP 46
>BC026884-1|AAH26884.1| 461|Homo sapiens chromosome 9 open reading
frame 43 protein.
Length = 461
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 292 CKASHHWRLCQRLQRSNPRV*ASSCGVP 209
C+ W +R++R +PR+ SSC P
Sbjct: 19 CQHPQCWATIRRIERGHPRILGSSCKTP 46
>AL137066-6|CAH70101.1| 461|Homo sapiens chromosome 9 open reading
frame 43 protein.
Length = 461
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 292 CKASHHWRLCQRLQRSNPRV*ASSCGVP 209
C+ W +R++R +PR+ SSC P
Sbjct: 19 CQHPQCWATIRRIERGHPRILGSSCKTP 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,423,661
Number of Sequences: 237096
Number of extensions: 1267623
Number of successful extensions: 5983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5983
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -