Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B09
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical ... 126 7e-30
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 27 4.4
Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical pr... 27 5.8
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 27 5.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 5.8
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 27 5.8
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical
protein Y45F10D.12 protein.
Length = 188
Score = 126 bits (304), Expect = 7e-30
Identities = 62/98 (63%), Positives = 78/98 (79%)
Frame = +1
Query: 106 YRYLARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVR 285
Y +LARRT KFN I+L+RL MSR NR P+SL++LAR ++K E V + TV++D R
Sbjct: 32 YAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKLARAVQKAGNENKTVVTLSTVTDDAR 91
Query: 286 LYTVPKMTVAALHVTEKARARILAAGGEMLTCDQLALR 399
LYTVPK++VAALHVTE ARARILAAGGE++T DQLAL+
Sbjct: 92 LYTVPKISVAALHVTEGARARILAAGGEIITLDQLALK 129
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 8 VGIDINHKHDRKVRRTEVKSQDVYLR 85
+GIDINHKHDR RRT KS++ YLR
Sbjct: 1 MGIDINHKHDRVARRTAPKSENPYLR 26
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -1
Query: 326 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 192
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 615 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 658
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -1
Query: 326 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 192
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 822 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 865
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 339 SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLAC-RLLHVACQTGQRNRRSVDTA 172
S+L+N G+C NSV P +D S Q AC + V+C G R +A
Sbjct: 933 SYLANAFQGFCCTANSVCPDNADYLIDDQSQQPRACTQGTFVSCPNGYACRSLTSSA 989
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 128 VRLAKYLYQFYTIXFSSTHPET*LR 54
+ L Y+Y TI FS HPET L+
Sbjct: 200 IHLGFYVYNSDTILFSRVHPETGLK 224
>Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical
protein M02B1.4 protein.
Length = 313
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -2
Query: 112 ICTSFTQXXSQVHILRLNFGAPNFPVVFMIDVDTHLV 2
+C +F+ S +H ++GAPN+ + ++ + HL+
Sbjct: 162 LCGTFS-TISNIHYALSDYGAPNYFMPVLVGLTAHLI 197
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 118 ARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIA-VVVGTVSNDVRLYT 294
A R K + + + MS I +PP+ L +L HM PT+ + V G N +LY+
Sbjct: 366 AARATPKPKKAKMSNVQMS-IVQPPLPLHQLQGHMSAPTKITAVPNVAAGFHQNQQQLYS 424
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.1 bits (57), Expect = 5.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 118 ARRTNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIA-VVVGTVSNDVRLYT 294
A R K + + + MS I +PP+ L +L HM PT+ + V G N +LY+
Sbjct: 1745 AARATPKPKKAKMSNVQMS-IVQPPLPLHQLQGHMSAPTKITAVPNVAAGFHQNQQQLYS 1803
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 126 HECQVQPDHPTEIVYE 173
HECQVQ D PT ++ E
Sbjct: 575 HECQVQNDEPTALLRE 590
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +2
Query: 137 SSTRSSYGDCL*AVSTD 187
SSTR+S+GDC+ ++S++
Sbjct: 569 SSTRNSFGDCMWSISSE 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,264,868
Number of Sequences: 27780
Number of extensions: 195737
Number of successful extensions: 493
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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