Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B08
         (267 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.86 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   1.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   2.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   2.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   2.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   3.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    20   4.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   4.6  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                19   8.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 0.86
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 136 VAAGKYKVLKKIGGGSFGDI 195
           + AG   +   IGGG FGD+
Sbjct: 628 IDAGYITIEAIIGGGEFGDV 647


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 141 RWKI*SAKKNRWW 179
           +W + + K+ RWW
Sbjct: 34  KWVVNNIKRKRWW 46


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -2

Query: 113 NEAIFMYQYK*SHNNESIQFKISNYALLNE 24
           N  +++YQ   S+NN+  ++  +  A ++E
Sbjct: 374 NNDVYLYQNTMSNNNQRTEWSATVKAAISE 403


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -2

Query: 113 NEAIFMYQYK*SHNNESIQFKISNYALLNE 24
           N  +++YQ   S+NN+  ++  +  A ++E
Sbjct: 412 NNDVYLYQNTMSNNNQRTEWSATVKAAISE 441


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 130 EFVAAGKYKVLKKIGGGSFGDIYLAINIGN 219
           E+V A   ++ K I G  F D+   I I N
Sbjct: 374 EYVLAVSNRIQKVIYGFDFNDVNFRILIAN 403


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 21  VFIQKCVI*DFELYTFIIVRLFILIHKNGFI 113
           V IQK    +F   +FI++  FI ++ N  +
Sbjct: 1   VKIQKYFGKNFPSTSFILINYFIFLYFNSLV 31


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 77  HNNESIQFKISNYALLNENN 18
           HNN + ++  +N    N NN
Sbjct: 91  HNNNNYKYNYNNKYNYNNNN 110


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 50  ISNYALLNENNPRA 9
           I NY L NEN+  A
Sbjct: 281 IRNYTLFNENSEAA 294


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 169 IGGGSFGDIYLAINIG 216
           +G G FG +Y A+  G
Sbjct: 73  LGSGGFGIVYKALYKG 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,393
Number of Sequences: 438
Number of extensions: 1866
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)