Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B04
         (412 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   100   1e-21
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   100   1e-21
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    30   1.4  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    30   1.4  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +3

Query: 222 LLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 380
           LLGKEKF+GVDIRV   GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIK
Sbjct: 59  LLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIK 111



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +1

Query: 82  IQAVQVFGRKKLHCGT-YCKRDMECAVMDAPSTGK--PRLLQYKLQEPIL 222
           +QAVQVFGRKK      YCKR      ++     +  P++LQYKLQEP+L
Sbjct: 9   VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLL 58


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +3

Query: 222 LLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 380
           LLGKEKF+GVDIRV   GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIK
Sbjct: 59  LLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIK 111



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +1

Query: 82  IQAVQVFGRKKLHCGT-YCKRDMECAVMDAPSTGK--PRLLQYKLQEPIL 222
           +QAVQVFGRKK      YCKR      ++     +  P++LQYKLQEP+L
Sbjct: 9   VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLL 58


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 216 YPLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 368
           +PL   E    VD+    +GGG   Q  AIR  I+ +L +F  + + E+ +
Sbjct: 314 FPLQFSELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 216 YPLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 368
           +PL   E    VD+    +GGG   Q  AIR  I+ +L +F  + + E+ +
Sbjct: 314 FPLQFSELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,569
Number of Sequences: 53049
Number of extensions: 346611
Number of successful extensions: 772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)