Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B04
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   5.4  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    20   9.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   9.5  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    20   9.5  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 320 RDGLSDCINLCNMSTTFSSHSNIHTRE 240
           RD   +CI +CNM         IHT E
Sbjct: 49  RDAYDNCITVCNMENV--DPLGIHTGE 73


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 294 PVQHVHHLFQSL*YPHQRTFPCLAK 220
           P  H HH  QSL + H R  P L++
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPPTLSE 374


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 302 CINLCNMSTTFSSHSNIH 249
           C+N   +++   SHSN++
Sbjct: 26  CVNKSMLNSHLKSHSNVY 43


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 130 YCKRDMECAVMDAP 171
           Y +R ++CA+ +AP
Sbjct: 47  YLRRQLKCALGEAP 60


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +2

Query: 263 DWKRWWTCCTGLCNQTS 313
           +W R W    G+  +TS
Sbjct: 132 EWDRLWVLDNGISGETS 148


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 130 YCKRDMECAVMDAP 171
           Y +R ++CA+ +AP
Sbjct: 47  YLRRQLKCALGEAP 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,538
Number of Sequences: 438
Number of extensions: 2242
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)