Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_B03
         (207 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    19   4.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    19   8.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    19   8.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   8.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    19   8.2  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +2

Query: 8   GERERTSLEXXXXXXXXXXXLTYNLFISSN 97
           G+R    L             TYN F+SS+
Sbjct: 68  GKRRNILLRRTDSMDSQNSASTYNSFLSSD 97


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 102 SRGRCLN*TID 134
           + GRCL+ T+D
Sbjct: 137 TEGRCLHYTVD 147


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 102 SRGRCLN*TID 134
           + GRCL+ T+D
Sbjct: 142 TEGRCLHYTVD 152


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 104 TWKMPKLNNRLKLQYL 151
           T +MP+L  ++ L+YL
Sbjct: 327 THRMPQLIRKIFLKYL 342


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 102 SRGRCLN*TID 134
           + GRCL+ T+D
Sbjct: 142 TEGRCLHYTVD 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,802
Number of Sequences: 438
Number of extensions: 645
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)