Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B01
(292 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 165 2e-40
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 144 4e-34
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 132 1e-30
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 119 1e-26
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 110 5e-24
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 103 1e-21
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 93 1e-18
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 92 2e-18
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 89 1e-17
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 81 6e-15
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 79 2e-14
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 74 5e-13
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 73 9e-13
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 70 1e-11
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 68 5e-11
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 66 1e-10
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 66 2e-10
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 61 5e-09
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 60 7e-09
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 49 2e-05
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 49 2e-05
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 49 2e-05
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 48 3e-05
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 4e-05
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 47 7e-05
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 47 9e-05
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 45 4e-04
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 4e-04
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 39 0.018
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 0.30
UniRef50_A4D2L9 Cluster: Hypothetical gene supported by AK024371... 33 0.92
UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4; Endopte... 32 2.1
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 2.1
UniRef50_UPI0000EBE439 Cluster: PREDICTED: similar to enterophil... 31 3.7
UniRef50_Q2JML6 Cluster: DNA-binding response regulator, LuxR fa... 31 3.7
UniRef50_A7S5M8 Cluster: Predicted protein; n=3; Nematostella ve... 31 4.9
UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A4AT62 Cluster: Probable aggregation factor core protei... 31 6.5
UniRef50_A3IUD0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q5CK33 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_O77346 Cluster: Putative uncharacterized protein MAL3P4... 31 6.5
UniRef50_Q6MMS8 Cluster: UPF0090 protein Bd1545; n=1; Bdellovibr... 31 6.5
UniRef50_A4B2C2 Cluster: Putative uncharacterized protein; n=2; ... 30 8.5
UniRef50_A5B7Z5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_Q55D24 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_A7AQW1 Cluster: Putative uncharacterized protein; n=1; ... 30 8.5
UniRef50_A2EXS4 Cluster: 200 kDa antigen p200, putative; n=1; Tr... 30 8.5
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 165 bits (401), Expect = 2e-40
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV V SR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
RVRKNTEARRKGRHCGFGKR+GT
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGT 84
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 144 bits (348), Expect = 4e-34
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV V SR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 132 bits (320), Expect = 1e-30
Identities = 61/76 (80%), Positives = 67/76 (88%)
Frame = +3
Query: 63 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNTE 242
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV V SRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 243 ARRKGRHCGFGKRRGT 290
ARRKGRH G GKR+GT
Sbjct: 61 ARRKGRHMGIGKRKGT 76
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 119 bits (287), Expect = 1e-26
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV V SR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
+R RKN ARRKGRH G GKR+GT
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRKGT 84
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 110 bits (265), Expect = 5e-24
Identities = 51/84 (60%), Positives = 65/84 (77%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV V SR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
AR RK EA+ GRH G G+R G+
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRREGS 104
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 103 bits (246), Expect = 1e-21
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV V S+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
A KNT KGRH GK +GT
Sbjct: 61 AHCEKNT---LKGRHMVIGKGKGT 81
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 93.1 bits (221), Expect = 1e-18
Identities = 40/84 (47%), Positives = 59/84 (70%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK SR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
R+R E + GRH G GKR+G+
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRKGS 84
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 91.9 bits (218), Expect = 2e-18
Identities = 36/83 (43%), Positives = 63/83 (75%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRG 287
R R E ++KGRH G G R+G
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKG 83
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
R RK EA++KGRH G GKR GT
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKRFGT 84
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 80.6 bits (190), Expect = 6e-15
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
R+R A+R GRH G GKRRGT
Sbjct: 61 GRIRARHAAKRLGRHSGHGKRRGT 84
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/80 (41%), Positives = 56/80 (70%)
Frame = +3
Query: 48 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARV 227
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK +S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 228 RKNTEARRKGRHCGFGKRRG 287
+K E R+KGR G G RRG
Sbjct: 66 KKLKEQRKKGRRRGPGSRRG 85
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 74.1 bits (174), Expect = 5e-13
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +3
Query: 57 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKN 236
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 237 TEARRKGRHCGFGKRRG 287
E ++KGR G G R+G
Sbjct: 66 HEKKKKGRRRGPGSRKG 82
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 73.3 bits (172), Expect = 9e-13
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +3
Query: 24 AHRARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 203
A R+ + +L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 30 AFRSGAARAELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA 89
Query: 204 AVLSRARVRKNTEARRKGRHCGFGKRRGT 290
T ARR+G H G KR+GT
Sbjct: 90 -----------TLARRRGWHMGIRKRKGT 107
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 69.7 bits (163), Expect = 1e-11
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRG 287
R R E R G G G R+G
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRKG 83
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 67.7 bits (158), Expect = 5e-11
Identities = 26/57 (45%), Positives = 42/57 (73%)
Frame = +3
Query: 63 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRK 233
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP + S++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 66.5 bits (155), Expect = 1e-10
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 203
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 204 ---------------AVLSRARVRKNTEARRKGRHCGFGKRRGT 290
+ SRAR + A+R GRH G+GKRRGT
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGT 104
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRG 287
R R+ G G G R+G
Sbjct: 61 GRARERDAKESYGHKKGAGSRKG 83
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 60.9 bits (141), Expect = 5e-09
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = +3
Query: 57 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
+R RK + KGR G G R+G+
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRKGS 89
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 60.5 bits (140), Expect = 7e-09
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 60 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNT 239
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 240 EARRKGRHCGFGKRRGT 290
E KGR G G RGT
Sbjct: 67 EQLAKGRRRGEGSVRGT 83
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 287 TSPLTKATVTSFPARLCVFANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDL 120
T PL A + + P+ VF+ S G D + LDDQ I D ++D+L G+ I DFI L
Sbjct: 110 TLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFIGL 165
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 49.2 bits (112), Expect = 2e-05
Identities = 22/82 (26%), Positives = 46/82 (56%)
Frame = +3
Query: 45 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRAR 224
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + +S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 225 VRKNTEARRKGRHCGFGKRRGT 290
+ ++ G G G+R+GT
Sbjct: 62 KKLRKAKKQSGLKRGIGRRKGT 83
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 49.2 bits (112), Expect = 2e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +3
Query: 60 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNT 239
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P +SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 240 EARRKGRHCGFGKRRG 287
++KGR G G R+G
Sbjct: 65 IKKKKGRRRGHGSRKG 80
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 48.4 bits (110), Expect = 3e-05
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 51 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRAR 224
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P +
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 225 VRKNTEARRKGRHCGFGKRRG 287
+ RRKGR G G+R+G
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKG 84
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 48.0 bits (109), Expect = 4e-05
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 45 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRAR 224
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 225 VR-KNTEARRKGRHCG 269
+ K + ++G G
Sbjct: 64 AQHKRRQKAKRGSKAG 79
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 47.2 bits (107), Expect = 7e-05
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 60 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNT 239
+ A ++ K ++ + + ++ +R ++R ++K+GL+ KP SR R R
Sbjct: 4 RETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITH 63
Query: 240 EARRKGRHCGFGKRRGT 290
E R+ GR G G RRGT
Sbjct: 64 EKRKSGRRRGRGSRRGT 80
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 46.8 bits (106), Expect = 9e-05
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +I +S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG 60
Query: 219 ARVRKNTEARR-KGRHCGFGKRRG 287
R+++ + R K G R+G
Sbjct: 61 GRLKERRKKRSLKSEGKKSGSRKG 84
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -3
Query: 206 SNGFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTAS 84
SN DDQ I D L D+L+G+ I DF+ L+ ++P L FT +
Sbjct: 3 SNRLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 4e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 66 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 197
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +3
Query: 45 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRAR 224
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 225 VRKNTEARRKGRHCGFGKRRG 287
+ +A+R R G ++G
Sbjct: 64 A-QTKKAQRNKRGTKQGSKQG 83
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 0.30
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 57 QKRLAASVMRCGKKKVWLDPNEINEIAN 140
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_A4D2L9 Cluster: Hypothetical gene supported by AK024371;
BC037920; n=1; Homo sapiens|Rep: Hypothetical gene
supported by AK024371; BC037920 - Homo sapiens (Human)
Length = 105
Score = 33.5 bits (73), Expect = 0.92
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 179 WSGHQETRCCPFPRSCSQKHRGAQERTSL-WL 271
W+ H T C FPR CSQ HRG++ TS+ W+
Sbjct: 55 WTTHI-TVCRCFPRHCSQGHRGSERITSISWV 85
>UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4;
Endopterygota|Rep: 60S ribosomal protein L14 - Aedes
aegypti (Yellowfever mosquito)
Length = 229
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 30 RARMSSLKLQKRLAASVMRCG-----KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIK 194
+ + S+ + Q+R AA RC + K+ L +E N I + ++ ++++ +G++
Sbjct: 134 KEKFSTTRWQERAAAKAKRCNLTDFDRFKLRLARSERNRIVSAQFKKLKKEVVNNGMLFG 193
Query: 195 KPVAVLSRARVRKNTEARRKGR 260
KPV R+N +++G+
Sbjct: 194 KPVKGTKPLPKRRNPIPKKEGK 215
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 96 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 203
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
>UniRef50_UPI0000EBE439 Cluster: PREDICTED: similar to
enterophilin-2L; n=2; Bos taurus|Rep: PREDICTED: similar
to enterophilin-2L - Bos taurus
Length = 288
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 287 TSPLTKATVTSFPARLCVFANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDL 120
TSP TK TV PAR+C+F G S + D++ + L+ G + F L
Sbjct: 211 TSPETKLTVKVHPARVCIFLEYEEGSISFYNMVDKSHIHTLSQGAFGGPLKPFFRL 266
>UniRef50_Q2JML6 Cluster: DNA-binding response regulator, LuxR
family; n=2; Synechococcus|Rep: DNA-binding response
regulator, LuxR family - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 229
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -3
Query: 281 PLTKATVTSFPARLCVFANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDLVWIKPH 102
PLT A F + F N G+ F+ +T+ HLT++LS +S+ + LV
Sbjct: 153 PLTPAEERVFREVIRGFTNKQIGEKL--FISPRTVQTHLTNILSKLSLENRSQLVRFAYE 210
Query: 101 LFFTASHNRGCK 66
+TA G K
Sbjct: 211 RGYTAEEEPGQK 222
>UniRef50_A7S5M8 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 827
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 IRHEAHRARMSSLKLQKRLAASVMRCGKKKVWL--DPNEINEI--ANTNSRQNIRKMIKD 179
I H A AR++ K+ + A R + WL D E++E+ T RQ++ + +K
Sbjct: 385 INHGAENARLNGEKIGSKTGAWSARYNNAEQWLQVDLGELSEVYKVATQGRQDLNQWVKS 444
Query: 180 GLVIKKPVAVLSRARVRKNTEARRKGRH 263
+ L + +K+ ++ G+H
Sbjct: 445 YTLAYSRDGALFQYLPKKSLQSSDAGQH 472
>UniRef50_Q7P0H5 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 329
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 72 ASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 209
A+ + G+ +VWLDP +N + +N+ M+ +++ P V
Sbjct: 117 AAALTYGESEVWLDPYALNRVRQDGKLKNVGLMLGWSEILETPFRV 162
>UniRef50_A4AT62 Cluster: Probable aggregation factor core protein
MAFp3, isoform C; n=2; Flavobacteriales|Rep: Probable
aggregation factor core protein MAFp3, isoform C -
Flavobacteriales bacterium HTCC2170
Length = 1201
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 230 ANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFI 126
A TS+ D +G D+ + + T ++SG+SI D+I
Sbjct: 1130 AGTSSYTDVDGNTDNTNLFEFSTPIVSGVSIGDYI 1164
>UniRef50_A3IUD0 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 668
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -3
Query: 239 CVFANTSA-GKDSNGFLDDQTILDHLTDVL-SGISISDFIDLVWI 111
C + N+S G+ + FL Q LDHL DV+ + + F+D +++
Sbjct: 236 CDYWNSSIIGQSNKLFLPKQDFLDHLNDVIDTSFEVMPFLDTIFV 280
>UniRef50_Q5CK33 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 594
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +3
Query: 48 LKLQKRLAASVMRCGKKKVWLDPNEI----NEIANTNSRQNIRKMIKDGLVIKKPVAVLS 215
L L +R S CG ++W+ + NE+AN + ++ I + KK + S
Sbjct: 403 LPLLRRFTCSPENCGDVRLWICIGDCYLAKNEVANNYRKIDLPCPIPPIMKSKKSAHIWS 462
Query: 216 RARVRKNTEARRKGRHCGFG 275
RA+ + T + R G G
Sbjct: 463 RAKNKSYTNSTFSSRKFGIG 482
>UniRef50_O77346 Cluster: Putative uncharacterized protein
MAL3P4.10; n=3; Plasmodium|Rep: Putative uncharacterized
protein MAL3P4.10 - Plasmodium falciparum (isolate 3D7)
Length = 1236
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 12 IRHEAHRARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNS 149
I HE + +K+ + L ++ C K +L+ EINE+A+ S
Sbjct: 664 ILHERNTYTNEKIKIMENLKTHILTCTYVKKYLNVQEINELASQKS 709
>UniRef50_Q6MMS8 Cluster: UPF0090 protein Bd1545; n=1; Bdellovibrio
bacteriovorus|Rep: UPF0090 protein Bd1545 - Bdellovibrio
bacteriovorus
Length = 174
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 KVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRAR-VRKNTEARRK 254
K W + + E+ + Q +R ++KD + IK P A++ RA+ V + T+ ++K
Sbjct: 123 KKWKNAKTVEEVLESADEQGVRFVVKD-VEIKIPYAMIDRAKLVFEYTKGQKK 174
>UniRef50_A4B2C2 Cluster: Putative uncharacterized protein; n=2;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Alteromonas macleodii 'Deep ecotype'
Length = 73
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 257 SFPARLCVFANTSAGKDSNGFLDDQTIL 174
+ PA LC AN +AG D F+D Q ++
Sbjct: 11 TLPAELCSIANINAGDDVESFVDRQGVI 38
>UniRef50_A5B7Z5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 673
Score = 30.3 bits (65), Expect = 8.5
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 244 ASVFLRTRARERTATG-FLMTRPSLIILRMFCLELVLAISLISFGSSHTFFLPHRITEAA 68
A VFL T A R TG F P ++ F L + +A +LISF +H + +++ AA
Sbjct: 576 AVVFL-TIANSRHETGHFARKVPRMLFFGFFTLFISIAATLISFCGAHIYIPGYKLKYAA 634
>UniRef50_Q55D24 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 92
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 45 SLKLQKRLAASVMRCGKKKVWLDPNEINEI---ANTNSRQNIRKMIKDGLVIKKP 200
SLK Q+++ +++RC K ++ P+E ++ N N R+ I++MI + P
Sbjct: 20 SLKHQEKIIDNLIRCDKASIFAKPSEDDKSYVPPNQNQRELIKEMINSLSYVSLP 74
>UniRef50_A7AQW1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 215
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 239 CVFANTSAGKDSNGFLDD--QTILDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGCK 66
C N A ++N FL D + D+LT VL GI + + ++ + PH + G
Sbjct: 30 CSLMNRIAKWNANVFLYDYSEAAYDYLTSVLGGILDVECLYIIGVNPHTIVAYGRSIGSG 89
Query: 65 P 63
P
Sbjct: 90 P 90
>UniRef50_A2EXS4 Cluster: 200 kDa antigen p200, putative; n=1;
Trichomonas vaginalis G3|Rep: 200 kDa antigen p200,
putative - Trichomonas vaginalis G3
Length = 737
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 21 EAHRARMSSLKLQKRLAASVMRCGKKKVWLDPNE-INEIANTNSRQNIRKMIKDGLVIKK 197
E H+ + +++ +R A R K + E INE ++RQ ++ I + + +++
Sbjct: 538 EKHKKALFHIQVTERKIAERKRMQYKMNEMKHKELINEREQNSARQRVKNAISEQIKLEE 597
Query: 198 PVAVLSRARVRKNTEARRKGR 260
+ +K EAR K R
Sbjct: 598 KKQQAAMMNAQKQAEAREKAR 618
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,524,928
Number of Sequences: 1657284
Number of extensions: 5300207
Number of successful extensions: 16363
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 16071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16358
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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