Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_B01
(292 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 132 5e-32
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 131 1e-31
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 32 0.089
02_05_0521 - 29726985-29727605 30 0.36
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 29 0.63
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 29 0.63
08_02_0630 - 19483485-19483671,19483761-19484179,19485180-194854... 28 1.4
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 1.9
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 27 1.9
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 27 1.9
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 1.9
12_01_0773 - 7039294-7039422,7039440-7039479,7039557-7039649,703... 27 2.5
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 2.5
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 27 2.5
11_01_0396 + 3003779-3005203 27 3.3
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 27 3.3
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440... 27 3.3
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 26 4.4
03_02_0284 - 7092506-7092927,7093249-7093414,7093996-7094187,709... 26 4.4
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 26 5.8
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 26 5.8
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 26 5.8
05_06_0134 + 25912474-25912561,25912678-25913230,25914063-259145... 26 5.8
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 26 5.8
01_06_1453 - 37465665-37466627 26 5.8
12_02_0161 + 14659338-14659467,14659553-14659888,14660034-146602... 25 7.7
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 25 7.7
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580... 25 7.7
10_08_0184 - 15570471-15570684,15571085-15571354,15571489-155717... 25 7.7
08_02_0563 - 18728901-18729014,18729094-18729324,18729358-187293... 25 7.7
08_01_0112 - 885965-886010,887084-887145,887908-887976,888076-88... 25 7.7
02_05_1089 + 34019162-34019164,34019249-34019465,34019558-340197... 25 7.7
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 132 bits (319), Expect = 5e-32
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP + SR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
+R R+ EA++KGRH G+GKRRGT
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGT 84
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 131 bits (316), Expect = 1e-31
Identities = 58/84 (69%), Positives = 72/84 (85%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP + SR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 219 ARVRKNTEARRKGRHCGFGKRRGT 290
+R R+ EA++KGRH G+GKRRGT
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGT 84
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 31.9 bits (69), Expect = 0.089
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 224 TSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTASH 81
TS KDS G +L H L + S + L W+KP F+ SH
Sbjct: 475 TSQEKDSIGRSCPVILLKHAKGSLISVGWSVILPLSWVKPFWFYLVSH 522
>02_05_0521 - 29726985-29727605
Length = 206
Score = 29.9 bits (64), Expect = 0.36
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 150 RQNIRKMIKDGLVIKKPVAVLSRARVRKNTEARRKGRHCGFGKRR 284
R +R M++ GL + +AVL A R + EARR+ R +RR
Sbjct: 54 RAAVRGMVRGGLAPRARLAVLRAAAFRDSREARRRIRRDRRRRRR 98
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 29.1 bits (62), Expect = 0.63
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 54 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVLSRAR 224
LQ+ L + K W D E+N + + R + KM+ D LV+ +A
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 225 VRKNTEARRKGRHCGFG 275
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 29.1 bits (62), Expect = 0.63
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 54 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVLSRAR 224
LQ+ L + K W D E+N + + R + KM+ D LV+ +A
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 225 VRKNTEARRKGRHCGFG 275
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>08_02_0630 -
19483485-19483671,19483761-19484179,19485180-19485413,
19485714-19485851
Length = 325
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 214 PALVFAKTQRRAGKDVTVALVRGEV 288
P LVF KT G V VAL+ G+V
Sbjct: 70 PVLVFPKTSTDGGSSVIVALLPGDV 94
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 188
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +2
Query: 179 WSGHQETRCCPFPRSCS----QKHRGAQERTSLWLW*EERYS 292
W G RC SCS K RG QE T LW ++R+S
Sbjct: 277 WFGGAMVRCLCGAGSCSGFLGAKSRGFQEATYLWEDDDDRFS 318
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +3
Query: 21 EAHRARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 197
+ +R R L K V R LDP +NE N R N+ IKD L ++
Sbjct: 528 DLYRVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 1.9
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNTEARRK 254
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>12_01_0773 -
7039294-7039422,7039440-7039479,7039557-7039649,
7039900-7040010,7040091-7040342,7040407-7040903,
7040923-7041777,7041883-7042143,7042183-7042551,
7042637-7042876
Length = 948
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 149 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 57
GIS+ D +DLV W K +FF N G KP+L
Sbjct: 462 GISVLGDAVDLVILWHKNDIFFGLGTNAGEKPVL 495
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -3
Query: 176 LDHLTDVLSGISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 57
+D+LT GIS+ D +DLV W K +FF + G KP+L
Sbjct: 456 IDYLT--ADGISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 496
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 39 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSR 218
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 219 ARVRKNTEARRK 254
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>11_01_0396 + 3003779-3005203
Length = 474
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 130 SLISFGSSHTFFLPHRITEAASLFCNFRELILAR*ASC-RIP 8
SL+S G+ +T L + I + C+ REL++ ASC R+P
Sbjct: 114 SLLSLGTENTPVLKNVIESLETKICDVRELVVLL-ASCPRLP 154
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 174 KDGLVIKKPVAVLSRARVRKNTEARRKGRHC---GFGKRR 284
KDG ++ + +RA R +T+A R+ HC G+G RR
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRR 213
>01_01_0591 -
4401847-4402063,4402860-4403002,4403339-4403447,
4403546-4404707,4405754-4405865,4405980-4406015
Length = 592
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -3
Query: 263 VTSFPARLCVFANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTAS 84
V + P RL + +A D+ +DD +L +S SD + L W + L A
Sbjct: 217 VAATPRRLTRLNHFTAAADAAAAMDDSGDEHQQRTLLKTLSRSDRVGLAWPEQPLDLLAK 276
Query: 83 H 81
H
Sbjct: 277 H 277
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 105 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRARVRKNTEARRKGRHCGFGK 278
++D N+ + + +SR ++ ++ GL +K PV VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>03_02_0284 -
7092506-7092927,7093249-7093414,7093996-7094187,
7094289-7094510
Length = 333
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 11 NSARGSPCQDEFPKVTEEAC 70
NSARG P D+ EEAC
Sbjct: 99 NSARGYPVVDDIKAALEEAC 118
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 108 LDPNEINEIANTNSRQNIRKMIKDGLVIKK 197
LDP +NE N R NI IKD L ++
Sbjct: 685 LDPAVVNETTLKNDRANIVAYIKDCLFARQ 714
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 108 LDPNEINEIANTNSRQNIRKMIKDGLVIKK 197
LDP +NE N R NI IKD L ++
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQ 657
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = -3
Query: 278 LTKATVTSFPARLCVFANTSAGKDSNGFLDDQTILDHLTDVLSGISISDFIDLVWIK 108
+ +A+ L + S G F + I DHL + +G + I +VWI+
Sbjct: 1264 IIRASTVHDEKTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIE 1320
>05_06_0134 +
25912474-25912561,25912678-25913230,25914063-25914556,
25914804-25914942,25915511-25915582,25915671-25915742,
25917202-25917282,25917385-25917545,25917626-25917894,
25917996-25918122,25918193-25918261,25918366-25918558,
25918605-25919046
Length = 919
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 105 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVLSRA 221
W D + NEI+ TN QNI D + + P AV+ A
Sbjct: 227 WFDAAKWNEISTTNRVQNI-----DNDLFEAPTAVMQTA 260
>02_02_0682 -
12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 LDPNEINEIANTNSRQNIRKMIKDGL-VIKKPVAVLSRARVRKNTEARRKGRHCGFGKRR 284
LDPN ++++AN S ++ + D + +SR +RK + R RH G R
Sbjct: 577 LDPNRLSDVANRLS--DVANRLSDAANRLSDAGNFVSRHSIRKLSFERSMSRHSSLGGSR 634
>01_06_1453 - 37465665-37466627
Length = 320
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -3
Query: 275 TKATVTSFPARLCVFANTSAGKDSNGFLDDQTILDHL---TDVLSGISISDFIDLV 117
T T+ + LC A+ A F DQ+ D L TDV S+S + +V
Sbjct: 216 TSTATTATTSMLCTDASVQAALGELNFAMDQSCFDSLGLPTDVAGAGSLSSWCSIV 271
>12_02_0161 +
14659338-14659467,14659553-14659888,14660034-14660266,
14660344-14660805,14660887-14661719,14661802-14661972,
14662052-14662352
Length = 821
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 84 RCGKKKVWLDPNEINEIANTNSRQNIRKMI 173
R GK+ +LDP+ +NE+ N RQ+ K++
Sbjct: 673 RLGKQVGFLDPSMVNEV---NLRQSFTKVV 699
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 149 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 57
GIS+ D IDLV W K +FF + G KP+L
Sbjct: 508 GISVLGDAIDLVILWHKNDIFFGLGTDAGEKPVL 541
>11_05_0010 -
18356835-18357080,18357475-18357672,18357780-18358046,
18358870-18359067,18359151-18359417,18359524-18359724,
18359807-18361363,18361499-18361859,18362602-18363467
Length = 1386
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 188 DQTILDHLTDVLSGISISDFIDLVWIKP 105
++ I+D + DVL I ID +W KP
Sbjct: 274 EKEIIDKIRDVLKDIRYFIIIDDIWDKP 301
>10_08_0184 -
15570471-15570684,15571085-15571354,15571489-15571711,
15571809-15571875,15571996-15572137,15572226-15572290
Length = 326
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 182 SGHQETRCCPFPRSCSQKHRGAQERTSLWLW*EER 286
S + +++ CPF R+C +K +SLWL+ ++R
Sbjct: 255 SRNTKSKSCPFCRACLKK----VNPSSLWLYTDDR 285
>08_02_0563 -
18728901-18729014,18729094-18729324,18729358-18729376,
18729457-18729627,18731145-18731377
Length = 255
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 108 LDPNEINEIANTNSRQNIRKMIKDGL 185
LDP INE N R NI IKD L
Sbjct: 94 LDPAVINETTLKNDRANIVGYIKDCL 119
>08_01_0112 -
885965-886010,887084-887145,887908-887976,888076-888123,
888205-888264,888392-888504,888578-888650,888725-888769,
889382-889527,890782-890842,891913-892056,892164-892400
Length = 367
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 12 IRHEAHRARMSSLKLQKRLAASVMRCGKK---KVWLDPNEINEIA 137
+ HE+ R S+ +++LAA + CG+ ++ DPN + A
Sbjct: 184 LNHESDALRFMSMVTEEQLAALFINCGQVVDCRMCGDPNSVLRFA 228
>02_05_1089 +
34019162-34019164,34019249-34019465,34019558-34019714,
34019935-34020071,34020387-34020490,34020593-34020688,
34020818-34020908,34021384-34021504,34021579-34021775,
34022605-34022705,34022778-34022833,34023689-34023778,
34023865-34023964,34024194-34024295,34024372-34024441,
34024696-34024850,34024944-34025068,34025126-34025144
Length = 646
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 193 LMTRPSLIILRMFCLELVLAISLISFGSSHTFFLP 89
++++ S + + C EL+ I++ S G +HTF P
Sbjct: 122 IVSKSSDLAITEECFELLSLIAIASDGGAHTFCEP 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,513,660
Number of Sequences: 37544
Number of extensions: 153159
Number of successful extensions: 462
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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