Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A21
(244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 113 2e-26
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 2.3
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 2.3
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 27 2.3
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 27 2.3
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 26 4.1
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 26 4.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 26 4.1
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 25 7.1
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 25 7.1
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 25 7.1
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 25 7.1
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 25 7.1
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 25 7.1
U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical pr... 25 9.4
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 25 9.4
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 25 9.4
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 25 9.4
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 25 9.4
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 25 9.4
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 25 9.4
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 25 9.4
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 113 bits (272), Expect = 2e-26
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +3
Query: 15 KCEMIPIEWVTRRLATGSFLKRNPGVSEGFRFTPPKQETFYKDDANHDPQWSEEQIVSAQ 194
KC MIPIEWV RR+ATGSFLKRNPGV EGFRF K ETF+KDDAN DPQW++EQIVS
Sbjct: 94 KCTMIPIEWVARRVATGSFLKRNPGVKEGFRFNDLKLETFFKDDANDDPQWTDEQIVSNG 153
Query: 195 SKFNGLTIGQDEVDYM 242
+ L IG++E+ M
Sbjct: 154 LMIDHLKIGREEISLM 169
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 FTPPKQETFYKDDANHDPQWSE 173
+ PP ++T DD+ HD W E
Sbjct: 104 YRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 FTPPKQETFYKDDANHDPQWSE 173
+ PP ++T DD+ HD W E
Sbjct: 104 YRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 FTPPKQETFYKDDANHDPQWSE 173
+ PP ++T DD+ HD W E
Sbjct: 104 YRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 FTPPKQETFYKDDANHDPQWSE 173
+ PP ++T DD+ HD W E
Sbjct: 104 YRPPGEDTAGSDDSEHDAGWIE 125
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 97 SETPGFLFRKEPVARRLVTHSIGIISHF 14
+E P LF+K P RLVT +I II+ F
Sbjct: 80 NEDPATLFKKLPAVARLVT-AIAIINGF 106
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 24 MIPIEWVTRRLATGSFLKRNPGVSE 98
M+P++W +R A+ S R+PG E
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 24 MIPIEWVTRRLATGSFLKRNPGVSE 98
M+P++W +R A+ S R+PG E
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 84 PGVSEGFRFTPPKQETFYKDDANHDP 161
PG S G F PP+ ++ + +H P
Sbjct: 7 PGSSSGGYFNPPRNNQYHYPENHHHP 32
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 97 SETPGFLFRKEPVARRLVTHSIGIISHF 14
+E P LF+K P RL+T +I II+ F
Sbjct: 47 NEDPATLFKKLPAVARLIT-AIAIINGF 73
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 25.0 bits (52), Expect = 7.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 58 LLAPS*REIQAFPKA-LDSHRPSKKPSIRTTQTTTRNGPKSRSCQLSPNS 204
L++PS E A P + H+P K + R TQ N S SP+S
Sbjct: 87 LMSPSESENPASPSPYMQEHKPLKMSTARRTQNPYFNPYSSGPLVKSPSS 136
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 97 KALDSHRPSKKPSI----RTTQTTTRNGPKSRSCQLSPN 201
KA ++ SKK S+ R +Q +NG S+ ++SP+
Sbjct: 702 KAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKSEISPS 740
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 97 KALDSHRPSKKPSI----RTTQTTTRNGPKSRSCQLSPN 201
KA ++ SKK S+ R +Q +NG S+ ++SP+
Sbjct: 702 KAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKSEISPS 740
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 121 SKKPSIRTTQTTTRNGPKSRS 183
S +PS QTTT NGP + S
Sbjct: 385 SSEPSATAKQTTTSNGPTTVS 405
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 121 SKKPSIRTTQTTTRNGPKSRS 183
S +PS QTTT NGP + S
Sbjct: 450 SSEPSATAKQTTTSNGPTTVS 470
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 121 SKKPSIRTTQTTTRNGPKSRS 183
S +PS QTTT NGP + S
Sbjct: 450 SSEPSATAKQTTTSNGPTTVS 470
>U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical
protein K08B12.2a protein.
Length = 449
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 24 MIPIEWVTRRLATGSFLKRNPGVSE 98
M P E + R+L+ G + NP VS+
Sbjct: 327 MFPFEDIDRKLSNGDSMLINPAVSQ 351
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 97 KALDSHRPSKKPSIRTTQTTTRNGPKS 177
+ + S RPS S RT+ + R GP++
Sbjct: 619 RQVTSSRPSSSASSRTSHSRPRTGPQA 645
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3
Query: 164 LRVVVCVVLIEGFLLGRCESKAFGNAWISLQEGASSEASRYP 39
L +++ V + G ++G C F + + + Q AS+ + YP
Sbjct: 1126 LLIILAVTVALGAIIGICAVCVFWSRYKTAQRNASNFSHSYP 1167
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -3
Query: 164 LRVVVCVVLIEGFLLGRCESKAFGNAWISLQEGASSEASRYP 39
L +++ V + G ++G C F + + + Q AS+ + YP
Sbjct: 1270 LLIILAVTVALGAIIGICAVCVFWSRYKTAQRNASNFSHSYP 1311
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 106 DSHRPSKKPSIRTTQTTTRNGPKSRSCQLSPN 201
+S + SKKPS + +++N P+S S P+
Sbjct: 497 NSKKGSKKPSPTKKKASSKNSPQSSSNSRRPS 528
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 109 SHRPSKKPSIRTTQTTTRNGPKSRSCQL 192
+ RPS++PSI T ++ R SR+ L
Sbjct: 805 TERPSERPSIETVRSQLRGMNSSRNDNL 832
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 109 SHRPSKKPSIRTTQTTTRNGPKSRSCQL 192
+ RPS++PSI T ++ R SR+ L
Sbjct: 805 TERPSERPSIETVRSQLRGMNSSRNDNL 832
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 97 KALDSHRPSKKPSIRTTQTTTRNGPKS 177
+ + S RPS S RT+ + R GP++
Sbjct: 619 RQVTSSRPSSSASSRTSHSRPRTGPQA 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,049,385
Number of Sequences: 27780
Number of extensions: 111516
Number of successful extensions: 334
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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