Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A20
         (196 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   0.44 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   0.44 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    20   2.3  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    20   2.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   4.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   5.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   5.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   5.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          18   9.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      18   9.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    18   9.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 0.44
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 182 RFLYSXYSAILNHPD 138
           +++YS Y+A++  PD
Sbjct: 139 QYIYSLYTAVITRPD 153


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 0.44
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 182 RFLYSXYSAILNHPD 138
           +++YS Y+A++  PD
Sbjct: 139 QYIYSLYTAVITRPD 153


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +3

Query: 36  SRVFF--CFICFLNEFYFLITYFS 101
           SR+ F  CF+CF   ++ +  + S
Sbjct: 408 SRIVFPVCFVCFNLMYWIIYLHIS 431


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +3

Query: 36  SRVFF--CFICFLNEFYFLITYFS 101
           SR+ F  CF+CF   ++ +  + S
Sbjct: 408 SRIVFPVCFVCFNLMYWIIYLHIS 431


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 89  NIFFYLINHMSIGRK 133
           N+   L NH+ IGRK
Sbjct: 804 NVLRELQNHVFIGRK 818


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 57  ICFLNEFYFLIT 92
           +C+LN F  L T
Sbjct: 563 VCYLNTFLLLAT 574


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 179 FLYSXYSAILNHPD 138
           F+Y+   AIL+ PD
Sbjct: 125 FIYALSVAILHRPD 138


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 57  ICFLNEFYFLIT 92
           +C+LN F  L T
Sbjct: 653 VCYLNTFLLLAT 664


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  LNEFYFLITY 95
           LN FYF++ +
Sbjct: 228 LNHFYFMLNH 237


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  LNEFYFLITY 95
           LN FYF++ +
Sbjct: 228 LNHFYFMLNH 237


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 92  IFFYLINHMSIG 127
           +FF L+N+ +IG
Sbjct: 318 LFFGLVNNSAIG 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,953
Number of Sequences: 438
Number of extensions: 337
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)