Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A19
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protei... 25 5.6
AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine r... 25 5.6
AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-... 25 5.6
Z81104-10|CAB03214.1| 293|Caenorhabditis elegans Hypothetical p... 25 7.3
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 25 7.3
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 25 7.3
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 25 7.3
AL033510-11|CAA22071.1| 293|Caenorhabditis elegans Hypothetical... 25 7.3
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 25 7.3
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 25 7.3
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 25 7.3
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protein 9
protein.
Length = 140
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 7 SARGLTKHSKSIVIRSINYLLIILDSNIR*TNEKII 114
+ GL KH K V+ I+ I L N R +KI+
Sbjct: 27 AVNGLVKHKKDFVVNLISGGNIALHVNFRFEKQKIV 62
>AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 61 protein.
Length = 312
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +1
Query: 31 SKSIVIRSINYLLIILDSNIR*TNEKIIPRQQYFKSRF 144
S ++ S+ Y+L+I D+N+R +++ P++ S F
Sbjct: 270 SSDLMTLSLPYILLIYDTNVR---KQVFPKKPKIMSNF 304
>AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-9
protein.
Length = 140
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 7 SARGLTKHSKSIVIRSINYLLIILDSNIR*TNEKII 114
+ GL KH K V+ I+ I L N R +KI+
Sbjct: 27 AVNGLVKHKKDFVVNLISGGNIALHVNFRFEKQKIV 62
>Z81104-10|CAB03214.1| 293|Caenorhabditis elegans Hypothetical
protein Y40H7A.8 protein.
Length = 293
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 40 IVIRSINYLLIILDSNIR*TNEKIIPRQ 123
+V S+ Y+L++ D N+R + +IP Q
Sbjct: 250 VVTFSMPYILLVFDLNVRVALKNVIPIQ 277
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 1 LNSARGLTKHSKSIVIRSINYLLIILDSNIR*TNEKIIPRQQYFKSRF 144
LN + L + + + +L+ +S I TNE P ++FK F
Sbjct: 29 LNRRKALALERSPLPVPKLGRVLLSANSTIDLTNEDDDPSNKWFKKTF 76
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 57 NAPYNNTFAMFCQSSCRI 4
+ PYN T A+FC++ R+
Sbjct: 219 DGPYNETIAIFCETVQRV 236
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 57 NAPYNNTFAMFCQSSCRI 4
+ PYN T A+FC++ R+
Sbjct: 372 DGPYNETIAIFCETVQRV 389
>AL033510-11|CAA22071.1| 293|Caenorhabditis elegans Hypothetical
protein Y40H7A.8 protein.
Length = 293
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 40 IVIRSINYLLIILDSNIR*TNEKIIPRQ 123
+V S+ Y+L++ D N+R + +IP Q
Sbjct: 250 VVTFSMPYILLVFDLNVRVALKNVIPIQ 277
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 202 ILCGYLTKTTIMTPVAISD 258
+LC Y +K T +TP+A S+
Sbjct: 46 LLCDYSSKNTTITPIASSN 64
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +1
Query: 19 LTKHSKSIVIRSINYLLIILDSNIR*TNEKIIPRQ 123
L +S ++ S+ Y+L++ DSN++ +I+P++
Sbjct: 270 LLLYSSDLMTLSLPYILLVFDSNVK---RQILPKR 301
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 202 ILCGYLTKTTIMTPVAISD 258
+LC Y +K T +TP+A S+
Sbjct: 46 LLCDYSSKNTTITPIASSN 64
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 24.6 bits (51), Expect = 9.7
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = +1
Query: 40 IVIRSINYLLIILDSNIR*TNEKIIPRQQYFKSRFLTDNY*MRRNVIQLTNDACILCGYL 219
IV SI +LI+ + I E I P Q+ F F Y R V L AC +CGY
Sbjct: 156 IVGTSIASILIVFYAYIL---EFIEPEQRVFLRSFFNWGY--ARLVFTL---ACFICGYW 207
Query: 220 TKTTIMT 240
I T
Sbjct: 208 RSAAIAT 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,251,299
Number of Sequences: 27780
Number of extensions: 86142
Number of successful extensions: 181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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