Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A17
(182 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 40 6e-05
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 38 2e-04
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 32 0.009
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 25 1.3
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 24 2.3
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 23 5.3
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 23 7.0
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 23 7.0
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 23 7.0
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 22 9.3
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 22 9.3
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 39.5 bits (88), Expect = 6e-05
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
FVEPTI++ + D + K E F P++ I+ ++ I+ N + L++ ++T N+
Sbjct: 382 FVEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTNNI 438
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 37.5 bits (83), Expect = 2e-04
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
F EPT+++ + D + E F P+ + D + I++ N+ D L+ ++ T NL
Sbjct: 377 FFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSDVGLAGYVFTNNL 433
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 32.3 bits (70), Expect = 0.009
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
F+ PTI + +VK E F P+V + D I+ N + L++ T++L
Sbjct: 377 FISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDL 433
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 1.3
Identities = 10/47 (21%), Positives = 21/47 (44%)
Frame = +1
Query: 10 PTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSS 150
PT++ ++ + + ECFAPI + ++ N + L +
Sbjct: 358 PTLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGA 404
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/56 (19%), Positives = 27/56 (48%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTEN 168
F+ PT+ T + + + + E F P++ + ++ N+ ++ L S + + N
Sbjct: 384 FIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALELANDSEYGLGSGVFSTN 439
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 23.0 bits (47), Expect = 5.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 144 KSVIDFVIVFDTSIEVRYFDAVHYRSEAF 58
K +ID + + D +E ++ YRS+ F
Sbjct: 378 KIIIDELSILDKELENKFSPLFQYRSDMF 406
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +3
Query: 6 GADDHHVVTARFSIGEVGMLRSYSVLHRNT 95
G D++ ++ ++ SIG G + YS+ +++
Sbjct: 63 GQDEYSILNSKHSIGIHGYVLVYSITSKSS 92
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 22.6 bits (46), Expect = 7.0
Identities = 11/60 (18%), Positives = 27/60 (45%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENLGDI 180
+ EPT+I + + E F P+ + D + + N+ L+ +L ++++ +
Sbjct: 382 YFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWANDSPVGLAGYLFSKDISRV 441
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 13 TIITWLPHDSPLVKSECFAPIV 78
TIITWL H + L+ F+ +V
Sbjct: 646 TIITWLMHPTHLLLVVMFSMLV 667
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 22.2 bits (45), Expect = 9.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 133 DHALSSFLNTENLG 174
DH ++SF+ TE LG
Sbjct: 296 DHGINSFIPTEYLG 309
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 22.2 bits (45), Expect = 9.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 90 FDAVHYRSEAFRL 52
FD VH R+E F+L
Sbjct: 488 FDGVHSRTETFKL 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,471
Number of Sequences: 5004
Number of extensions: 11878
Number of successful extensions: 39
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 2,362,478
effective HSP length: 41
effective length of database: 2,157,314
effective search space used: 40988966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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