Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A17
(182 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 46 6e-06
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 34 0.014
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 33 0.024
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 33 0.043
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 33 0.043
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 32 0.056
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 32 0.075
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 31 0.099
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 31 0.13
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 31 0.17
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 29 0.53
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 29 0.70
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 27 2.1
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 27 2.1
02_05_1282 + 35442730-35442841,35443040-35443105,35443195-354432... 27 2.8
11_06_0183 - 20999343-20999865,21000351-21000748 26 3.7
10_07_0037 - 12239296-12239367,12239484-12239606,12239699-122397... 26 4.9
08_01_0784 + 7600691-7601055,7601530-7601765,7601896-7602068,760... 26 4.9
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 26 4.9
04_04_0950 + 29609484-29611025 25 6.5
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 25 8.6
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 25 8.6
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 45.6 bits (103), Expect = 6e-06
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTE 165
FV+PTI+ P +P+V+ E F P++Y +++ +L ++ NN V LSS + T+
Sbjct: 404 FVQPTIVEISP-SAPVVREELFGPVLYVMKVQNLKEAVEINNSVPQGLSSSIFTK 457
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 34.3 bits (75), Expect = 0.014
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 4 VEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTEN 168
+ PTI +P DS ++K E F P++ I + + N + AL+++L T++
Sbjct: 306 IAPTIFMDVPLDSGIMKEEIFGPLLPIITVDKIHESFALINSMTKALAAYLFTKD 360
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 33.5 bits (73), Expect = 0.024
Identities = 13/55 (23%), Positives = 32/55 (58%)
Frame = +1
Query: 4 VEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTEN 168
+ PT++ +P D+ L+ E F P++ + + ++ I++ N L+++L T++
Sbjct: 335 IAPTVLLDVPLDTTLMAEEIFGPLLPIVTVDKIEDSIQFINSRTKPLAAYLFTKD 389
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 32.7 bits (71), Expect = 0.043
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
++EPTI T + D + + E F P++ ++ ++ I+ N + L++ L T ++
Sbjct: 405 YIEPTIFTNVKDDMVIAREEIFGPVMCLMKFKTVEEAIERANGTRYGLAAGLVTRDI 461
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 32.7 bits (71), Expect = 0.043
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
F EPT++ + +D L + E F P+ + + I+ N+ + L++++ T+++
Sbjct: 438 FYEPTVVGNVSNDMLLFREEVFGPVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSI 494
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 32.3 bits (70), Expect = 0.056
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
+++PTI + + + + + E F P+ ++ DL+ IK N + L++ + T NL
Sbjct: 428 YIQPTIFSDVQDNMRIAQEEIFGPVQSILKFNDLNEVIKRANASQYGLAAGVFTNNL 484
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 31.9 bits (69), Expect = 0.075
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 4 VEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKY--NNEVDHALSSFLNTENL 171
+EPT++ P DS ++ E F PI+ I + ++ I Y + A+ +F N E L
Sbjct: 262 IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNNERL 319
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 31.5 bits (68), Expect = 0.099
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
++EPTI + + + + E F P++ ++ ++ I+ N + L++ + T+NL
Sbjct: 394 YIEPTIFVDVKEEMTIAQEEIFGPVMSLMKFKTVEEAIEKANCTKYGLAAGIVTKNL 450
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 31.1 bits (67), Expect = 0.13
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 4 VEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTEN 168
+EPTI+ P DS ++ E F P++ I + ++ I + L+ + T+N
Sbjct: 334 IEPTILLNPPLDSAIMTEEIFGPLLPIITVKKIEDSIAFVRARPRPLAVYAFTKN 388
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 30.7 bits (66), Expect = 0.17
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKY--NNEVDHALSSFLNTENL 171
++EPTI+ P DS ++ E F P++ I + + I + + A+ +F N E L
Sbjct: 186 WIEPTIVLNPPFDSDIMMEEIFGPLLPIITVKKTEDCIAFLKSKPKPLAIYAFTNNEKL 244
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
F+EPTIIT + + + E F P++ E ++ N+ + L+ + + +L
Sbjct: 376 FIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISNDL 432
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 28.7 bits (61), Expect = 0.70
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALS 147
++EPTIIT + + + E F P++ E + I+ N+ + L+
Sbjct: 395 YIEPTIITDVDTSMQIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLA 443
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 73 IVY-CIEIPDLDTGIKYNNEVDHALSSFLNTENL 171
I+Y C+++ ++D+ + Y N+V ++ S+ TE L
Sbjct: 565 IIYLCVKLMEIDSYVAYGNDVVNSFSTGNQTEGL 598
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNN 126
FV PT++ + + K E F P++ ++ LD I+ N
Sbjct: 388 FVGPTLLADVKSEMECYKEEIFGPVLLLMKAESLDDAIQIVN 429
>02_05_1282 +
35442730-35442841,35443040-35443105,35443195-35443282,
35443393-35443474,35443589-35443740,35443866-35443990,
35444309-35444367
Length = 227
Score = 26.6 bits (56), Expect = 2.8
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 61 CFAPIVYCIEIPD 99
CF+ +++C+E+PD
Sbjct: 173 CFSSLIFCVEVPD 185
>11_06_0183 - 20999343-20999865,21000351-21000748
Length = 306
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 31 PHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHALSSFLNTEN 168
PHDS + P Y +E P D N ++H F TEN
Sbjct: 73 PHDSSAPTTGGGVPHFYKLEFPKFDGKDDPLNWLNHCEQFFFRTEN 118
>10_07_0037 -
12239296-12239367,12239484-12239606,12239699-12239758,
12239892-12240009,12240133-12240200,12240307-12240378,
12240677-12240834,12240964-12241199,12241643-12242007
Length = 423
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 14 RSSRGYRTILHW*SRNASLL*CTASKYLTSILV 112
R RGYR I+H R S+L C +Y+ +++
Sbjct: 300 RDRRGYRPIMHLHERTLSVLAC---RYVDEVII 329
>08_01_0784 +
7600691-7601055,7601530-7601765,7601896-7602068,
7602344-7602430,7602538-7602605,7602732-7602849,
7602983-7603042,7603135-7603257,7603377-7603448
Length = 433
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 14 RSSRGYRTILHW*SRNASLL*CTASKYLTSILV 112
R RGYR I+H R S+L C +Y+ +++
Sbjct: 310 RDRRGYRPIMHLHERTLSVLAC---RYVDEVII 339
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +1
Query: 1 FVEPTIITWLPHDSPLVKSECFAPIVYCIEIPDLDTGIKYNNEVDHAL 144
F PT++ + H +++ E F PI+ ++ + +K N+ + L
Sbjct: 391 FFPPTVLVNVNHTMKIMQEEAFGPILPIMKFNSDEEVVKLANDSKYGL 438
>04_04_0950 + 29609484-29611025
Length = 513
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 165 FSVKKRGKSVIDFVIVF--DTSIEVRYFDAVHYRSEAFRLHQW 43
+ V G +D ++ D S YFDA+ E F+LH++
Sbjct: 381 YLVVTAGSGQMDLLVALHPDLSSRPEYFDAILNGLEVFKLHKY 423
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 154 EKRKERDRLRYCI*YQYRGQVFRCSTL*ERSIPTSPMENR 35
E R E+ +LR+ Q++G + E S+ +SP+E +
Sbjct: 16 EARSEKQKLRFLSWVQHQGGKSKSKKPVEPSVESSPVEEK 55
>03_03_0186 +
15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 78 HYRSEAFRLHQWRIVR*PRDDRRLH 4
H R +AF+ WR+++ +DR L+
Sbjct: 150 HDRKDAFKGFLWRVLKLKEEDRELN 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,581,523
Number of Sequences: 37544
Number of extensions: 68858
Number of successful extensions: 167
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 14,793,348
effective HSP length: 40
effective length of database: 13,291,588
effective search space used: 265831760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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