Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A17
         (182 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   1.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        19   7.2  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        18   9.5  

>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
          protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -1

Query: 38 SCGNHVMIVG 9
          +CG+H++IVG
Sbjct: 52 TCGSHIIIVG 61


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = +3

Query: 66  RSYSVLHRNT*PRYWYQIQ 122
           R  +   +   P YWY+ Q
Sbjct: 285 RQMTTSRKKVLPYYWYKYQ 303


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 119 YLIPVSRSGISMQYTIGA 66
           YL+P     +S  Y +GA
Sbjct: 43  YLLPKDVVVVSSNYRVGA 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,804
Number of Sequences: 438
Number of extensions: 868
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)