BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A14
(314 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein. 29 2.2
BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 1... 29 2.2
BC020743-1|AAH20743.1| 248|Homo sapiens Unknown (protein for IM... 29 2.2
M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease ... 28 5.0
D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein. 28 5.0
D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein. 28 5.0
D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein. 28 5.0
AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid... 28 5.0
AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein. 28 5.0
AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein. 28 5.0
AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein. 28 5.0
AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein. 28 5.0
BC024194-1|AAH24194.2| 340|Homo sapiens 3-hydroxymethyl-3-methy... 28 6.6
AL590406-2|CAI40662.1| 241|Homo sapiens protein ( Human DNA seq... 28 6.6
AF131827-1|AAD20054.1| 191|Homo sapiens Unknown protein. 28 6.6
U42594-1|AAD00019.1| 782|Homo sapiens fibronectin protein. 27 8.8
U42593-1|AAD00018.1| 545|Homo sapiens fibronectin protein. 27 8.8
U42458-1|AAD09450.1| 287|Homo sapiens fibronectin protein. 27 8.8
EF550132-1|ABR68536.1| 523|Homo sapiens fibronectin splice vari... 27 8.8
BX640638-1|CAE45786.1| 1034|Homo sapiens hypothetical protein pr... 27 8.8
BC117176-1|AAI17177.1| 2176|Homo sapiens fibronectin 1 protein. 27 8.8
AL832202-1|CAD91166.1| 2265|Homo sapiens hypothetical protein pr... 27 8.8
AB209840-1|BAD93077.1| 2351|Homo sapiens Fibronectin 1 variant p... 27 8.8
AB209287-1|BAD92524.1| 1011|Homo sapiens Fibronectin 1 variant p... 27 8.8
AB191261-1|BAD52437.1| 2265|Homo sapiens fibronectin 1 protein. 27 8.8
>S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein.
Length = 729
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 40 SRKQVVAKSPKLPKKP-PRARSS*HC*QLSFIYNCDTSFTERCSE-GKKGYKLIPFLYFL 213
S ++V + P PKKP P S + ++FI F ER S G K ++ FLYFL
Sbjct: 18 SIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVV--NEFCERFSYYGMKAVLILYFLYFL 75
Query: 214 H 216
H
Sbjct: 76 H 76
>BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 15
(H+/peptide transporter), member 2 protein.
Length = 729
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 40 SRKQVVAKSPKLPKKP-PRARSS*HC*QLSFIYNCDTSFTERCSE-GKKGYKLIPFLYFL 213
S ++V + P PKKP P S + ++FI F ER S G K ++ FLYFL
Sbjct: 18 SIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVV--NEFCERFSYYGMKAVLILYFLYFL 75
Query: 214 H 216
H
Sbjct: 76 H 76
>BC020743-1|AAH20743.1| 248|Homo sapiens Unknown (protein for
IMAGE:4770307) protein.
Length = 248
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 40 SRKQVVAKSPKLPKKP-PRARSS*HC*QLSFIYNCDTSFTERCSE-GKKGYKLIPFLYFL 213
S ++V + P PKKP P S + ++FI F ER S G K ++ FLYFL
Sbjct: 18 SIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVV--NEFCERFSYYGMKAVLILYFLYFL 75
Query: 214 H 216
H
Sbjct: 76 H 76
>M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease
protein.
Length = 969
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 747 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 781
>D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 734 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 768
>D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 734 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 768
>D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 747 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 781
>AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid
cleaving system 4 isoform a preproprotein variant
protein.
Length = 800
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 578 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 612
>AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 747 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 781
>AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 734 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 768
>AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 734 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 768
>AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein.
Length = 969
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 RRCNKGCELQGSRWWQSHQSCRKS-HQGQEVASTV 115
RRC+KGCE SR SCR+ + QE+ + V
Sbjct: 747 RRCHKGCETCSSRAATQCLSCRRGFYHHQEMNTCV 781
>BC024194-1|AAH24194.2| 340|Homo sapiens
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 202 LYFLHGLYCNIIVNLYKVIHTPQMFC 279
+Y L+GL N VNLYKV+ C
Sbjct: 297 IYMLNGLGLNTGVNLYKVMEAGDFIC 322
>AL590406-2|CAI40662.1| 241|Homo sapiens protein ( Human DNA
sequence from clone RP11-418P12 on chromosome 6. ).
Length = 241
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 202 LYFLHGLYCNIIVNLYKVIHTPQMFC 279
+Y L+GL N VNLYKV+ C
Sbjct: 198 IYMLNGLGLNTGVNLYKVMEAGDFIC 223
>AF131827-1|AAD20054.1| 191|Homo sapiens Unknown protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 202 LYFLHGLYCNIIVNLYKVIHTPQMFC 279
+Y L+GL N VNLYKV+ C
Sbjct: 148 IYMLNGLGLNTGVNLYKVMEAGDFIC 173
>U42594-1|AAD00019.1| 782|Homo sapiens fibronectin protein.
Length = 782
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 382 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 415
>U42593-1|AAD00018.1| 545|Homo sapiens fibronectin protein.
Length = 545
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 145 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 178
>U42458-1|AAD09450.1| 287|Homo sapiens fibronectin protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 166 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 199
>EF550132-1|ABR68536.1| 523|Homo sapiens fibronectin splice variant
C protein.
Length = 523
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 69 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 102
>BX640638-1|CAE45786.1| 1034|Homo sapiens hypothetical protein
protein.
Length = 1034
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 383 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 416
>BC117176-1|AAI17177.1| 2176|Homo sapiens fibronectin 1 protein.
Length = 2176
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 1614 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 1647
>AL832202-1|CAD91166.1| 2265|Homo sapiens hypothetical protein
protein.
Length = 2265
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 1703 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 1736
>AB209840-1|BAD93077.1| 2351|Homo sapiens Fibronectin 1 variant
protein.
Length = 2351
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 1700 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 1733
>AB209287-1|BAD92524.1| 1011|Homo sapiens Fibronectin 1 variant
protein.
Length = 1011
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 360 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 393
>AB191261-1|BAD52437.1| 2265|Homo sapiens fibronectin 1 protein.
Length = 2265
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 121 AVNSASYFLPLVAFSAALVTLPPPASLKFTAFITPTA 11
A N + PLV A+ T+P P LKFT +TPT+
Sbjct: 1614 AQNPSGESQPLV--QTAVTTIPAPTDLKFTQ-VTPTS 1647
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,107,634
Number of Sequences: 237096
Number of extensions: 728203
Number of successful extensions: 1571
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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