Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A13
         (333 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069801-1|AAL39946.1|  766|Drosophila melanogaster SD03967p pro...    28   2.5  
AE014134-294|AAN10460.1|  766|Drosophila melanogaster CG17646-PB...    28   2.5  
AE014134-293|AAF51341.3|  766|Drosophila melanogaster CG17646-PA...    28   2.5  

>AY069801-1|AAL39946.1|  766|Drosophila melanogaster SD03967p
           protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 240 GPLPELIMYCTSGRLVCPLYH 302
           GP+ EL+ +    +LVCP YH
Sbjct: 333 GPVRELVPFLADQQLVCPSYH 353


>AE014134-294|AAN10460.1|  766|Drosophila melanogaster CG17646-PB,
           isoform B protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 240 GPLPELIMYCTSGRLVCPLYH 302
           GP+ EL+ +    +LVCP YH
Sbjct: 333 GPVRELVPFLADQQLVCPSYH 353


>AE014134-293|AAF51341.3|  766|Drosophila melanogaster CG17646-PA,
           isoform A protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 240 GPLPELIMYCTSGRLVCPLYH 302
           GP+ EL+ +    +LVCP YH
Sbjct: 333 GPVRELVPFLADQQLVCPSYH 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,118
Number of Sequences: 53049
Number of extensions: 362890
Number of successful extensions: 908
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)