Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A11
(188 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 28 1.1
U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical pr... 28 1.1
AF067613-4|AAU20845.1| 327|Caenorhabditis elegans Hypothetical ... 27 1.8
Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical pr... 26 4.3
Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 25 5.6
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 25 9.9
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 25 9.9
Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical pr... 25 9.9
Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical pr... 25 9.9
Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical pr... 25 9.9
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 127 ISTVLNIQRRRAVRQSCHLKQTYIHIPNTYILF 29
+ V N RR R +C L +T + +PN Y+ F
Sbjct: 346 VKQVPNSSPRRDKRDNCFLIETPLQVPNHYLSF 378
>U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical
protein F27D9.8a protein.
Length = 513
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 127 ISTVLNIQRRRAVRQSCHLKQTYIHIPNTYILF 29
+ V N RR R +C L +T + +PN Y+ F
Sbjct: 346 VKQVPNSSPRRDKRDNCFLIETPLQVPNHYLSF 378
>AF067613-4|AAU20845.1| 327|Caenorhabditis elegans Hypothetical
protein F56D6.7 protein.
Length = 327
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 157 SYY*S*ML*NISTVLNIQRRRAVRQSCHLKQTYIHIPNTYILFHTFIFIFLV 2
SYY +L IS +L I +VR+ HL+ ++ P YI+ I +F+V
Sbjct: 187 SYYSLYILLFISVLLYIPVIISVRKLSHLQSAQLNNPQRYIMIQ-IIVVFIV 237
>Z74033-5|CAF31473.1| 333|Caenorhabditis elegans Hypothetical
protein F38B7.7 protein.
Length = 333
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 130 NISTVLNIQRRRAVRQSCHLKQTYIHIPNTYILFHTFIFIFL 5
N S V ++ R S +L Y + N YIL TFI +FL
Sbjct: 35 NSSIVYIFFNEKSERTSFNLICVYRSLSNIYILATTFIGLFL 76
>Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical
protein T09F5.16 protein.
Length = 311
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -2
Query: 94 AVRQSCHLKQTYIHIPNTYILFHTFIFIF 8
++R++ HL +H P YI++ + +F
Sbjct: 193 SIRKARHLSSFKLHRPQNYIMYQLLLALF 221
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 97 VYAVCLVQWKYF-IAFSFNNMSCVVNL 174
+ +C VQWK+F A+ + C++NL
Sbjct: 222 IVKLCSVQWKWFSAAYVLLFVDCILNL 248
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = -3
Query: 51 SLTHIFCF--THLFLFSSC 1
SL HIFCF TH+ S+C
Sbjct: 41 SLIHIFCFTATHISSVSNC 59
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = -3
Query: 51 SLTHIFCF--THLFLFSSC 1
SL HIFCF TH+ S+C
Sbjct: 41 SLIHIFCFTATHISSVSNC 59
>Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 59 VCLFKVTALPHSTSTLYV*YSG 124
V LF T LPH+ TL + Y G
Sbjct: 324 VLLFAFTWLPHNVVTLMIEYDG 345
>Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical
protein T05A1.1b protein.
Length = 387
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 59 VCLFKVTALPHSTSTLYV*YSG 124
V LF T LPH+ TL + Y G
Sbjct: 281 VLLFAFTWLPHNVVTLMIEYDG 302
>Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 59 VCLFKVTALPHSTSTLYV*YSG 124
V LF T LPH+ TL + Y G
Sbjct: 324 VLLFAFTWLPHNVVTLMIEYDG 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,446,492
Number of Sequences: 27780
Number of extensions: 71551
Number of successful extensions: 193
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 12,740,198
effective HSP length: 42
effective length of database: 11,573,438
effective search space used: 231468760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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