Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A09
         (171 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              19   5.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    19   7.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   7.3  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    19   7.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    18   9.7  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/11 (45%), Positives = 11/11 (100%)
 Frame = -2

Query: 110 IISLYFYLLMR 78
           ++SLY+YL+++
Sbjct: 8   LVSLYWYLILQ 18


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 84  DEVINYLKKKQ 52
           ++V+NYLK K+
Sbjct: 84  NKVVNYLKTKR 94


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 108 YFFIFLFTDEVINY 67
           Y+F +L   E INY
Sbjct: 442 YWFAYLSRSERINY 455


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 84  DEVINYLKKKQ 52
           ++V+NYLK K+
Sbjct: 84  NKVVNYLKTKR 94


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 108 NHTTSTKCQY 137
           N T STKC Y
Sbjct: 628 NVTLSTKCPY 637


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/27 (22%), Positives = 17/27 (62%)
 Frame = -1

Query: 105 FFIFLFTDEVINYLKKKQKNSRLVLSP 25
           +FIFL+ + ++ + +   +  +++ SP
Sbjct: 21  YFIFLYFNSLVRFRRFTIELDKVLESP 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,034
Number of Sequences: 438
Number of extensions: 524
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used:  2611500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)