Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A07
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 184 2e-47
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 184 2e-47
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 163 4e-41
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 163 4e-41
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 156 7e-39
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 135 1e-32
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 132 8e-32
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 132 8e-32
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 108 2e-24
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 105 2e-23
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 76 1e-14
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 76 1e-14
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 72 2e-13
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 62 1e-10
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 54 3e-08
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 31 0.48
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 31 0.48
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 27 4.4
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 184 bits (449), Expect = 2e-47
Identities = 92/125 (73%), Positives = 97/125 (77%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKE
Sbjct: 300 RARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKE 359
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
LNKSINPDE IL GDKSE VQD GIETAGGVMT LIKRN+
Sbjct: 360 LNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNT 419
Query: 371 TIPTK 385
TIPTK
Sbjct: 420 TIPTK 424
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 384 RQTQTFNTYSDNQPGVL 434
+ QTF TYSDNQPGVL
Sbjct: 424 KTAQTFTTYSDNQPGVL 440
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 184 bits (449), Expect = 2e-47
Identities = 92/125 (73%), Positives = 97/125 (77%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKE
Sbjct: 300 RARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKE 359
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
LNKSINPDE IL GDKSE VQD GIETAGGVMT LIKRN+
Sbjct: 360 LNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNT 419
Query: 371 TIPTK 385
TIPTK
Sbjct: 420 TIPTK 424
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 384 RQTQTFNTYSDNQPGVL 434
+ QTF TYSDNQPGVL
Sbjct: 424 KTAQTFTTYSDNQPGVL 440
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 163 bits (397), Expect = 4e-41
Identities = 79/126 (62%), Positives = 93/126 (73%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKE
Sbjct: 300 RARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKE 359
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
LN SINPDE +L G K E ++D GIETAGGVMT LI RN+
Sbjct: 360 LNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNT 419
Query: 371 TIPTKA 388
IPTKA
Sbjct: 420 RIPTKA 425
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 393 QTFNTYSDNQPGV 431
+TF TY+DNQPGV
Sbjct: 427 KTFTTYADNQPGV 439
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 163 bits (397), Expect = 4e-41
Identities = 79/126 (62%), Positives = 93/126 (73%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RARFEEL ADLFR T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKE
Sbjct: 300 RARFEELCADLFRKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKE 359
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
LN SINPDE +L G K E ++D GIETAGGVMT LI RN+
Sbjct: 360 LNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNT 419
Query: 371 TIPTKA 388
IPTKA
Sbjct: 420 RIPTKA 425
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 393 QTFNTYSDNQPGV 431
+TF TY+DNQPGV
Sbjct: 427 KTFTTYADNQPGV 439
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 156 bits (378), Expect = 7e-39
Identities = 76/126 (60%), Positives = 90/126 (71%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RARFEEL ADLFR T+EPVEK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+
Sbjct: 300 RARFEELCADLFRKTLEPVEKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKD 359
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
LN SINPDE +L G K + ++D GIETAGGVMT LI RN+
Sbjct: 360 LNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDRNT 419
Query: 371 TIPTKA 388
IP KA
Sbjct: 420 RIPAKA 425
Score = 28.7 bits (61), Expect = 1.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 384 RQTQTFNTYSDNQPGV 431
+ ++TF TY+DNQPGV
Sbjct: 424 KASKTFTTYADNQPGV 439
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 135 bits (327), Expect = 1e-32
Identities = 67/125 (53%), Positives = 83/125 (66%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RA+FEELN DLFR+T++PV+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE
Sbjct: 326 RAKFEELNMDLFRATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKE 385
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
++ INPDE ++ G E D GIET GGVMT LI RN+
Sbjct: 386 PSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTKLIGRNT 443
Query: 371 TIPTK 385
IPTK
Sbjct: 444 VIPTK 448
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 132 bits (320), Expect = 8e-32
Identities = 64/125 (51%), Positives = 85/125 (68%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RA+FEELN DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE
Sbjct: 329 RAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKE 388
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
++ INPDE ++ G+ E+ + GIET GGVMT LI RN+
Sbjct: 389 PSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNT 446
Query: 371 TIPTK 385
IPTK
Sbjct: 447 VIPTK 451
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 132 bits (320), Expect = 8e-32
Identities = 64/125 (51%), Positives = 85/125 (68%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RA+FEELN DLFR+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE
Sbjct: 329 RAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKE 388
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
++ INPDE ++ G+ E+ + GIET GGVMT LI RN+
Sbjct: 389 PSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNT 446
Query: 371 TIPTK 385
IPTK
Sbjct: 447 VIPTK 451
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 108 bits (259), Expect = 2e-24
Identities = 56/125 (44%), Positives = 77/125 (61%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RA+FE++ DL + T+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK
Sbjct: 327 RAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKV 385
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
+K++NPDE +L GD V D GIET GG+MT LI RN+
Sbjct: 386 PSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNT 441
Query: 371 TIPTK 385
TIPTK
Sbjct: 442 TIPTK 446
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 105 bits (251), Expect = 2e-23
Identities = 55/125 (44%), Positives = 75/125 (60%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
RA+FE++ DL + T+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK
Sbjct: 327 RAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKV 385
Query: 191 LNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNS 370
+K++NPDE +L GD V D GIET GG+MT LI RN+
Sbjct: 386 PSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNT 441
Query: 371 TIPTK 385
TIPTK
Sbjct: 442 TIPTK 446
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 75.8 bits (178), Expect = 1e-14
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +2
Query: 8 ARARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNG 184
+R FE +L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F +
Sbjct: 295 SRTDFESWIENLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESN 354
Query: 185 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 364
+ +SI+PDE +L G +EEVQD G++ M+ LIK+
Sbjct: 355 TRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKK 412
Query: 365 NSTIP 379
+ P
Sbjct: 413 GTVFP 417
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 75.8 bits (178), Expect = 1e-14
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +2
Query: 8 ARARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNG 184
+R FE +L +T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F +
Sbjct: 295 SRTDFESWIENLLMATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESN 354
Query: 185 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 364
+ +SI+PDE +L G +EEVQD G++ M+ LIK+
Sbjct: 355 TRICESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKK 412
Query: 365 NSTIP 379
+ P
Sbjct: 413 GTVFP 417
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 71.7 bits (168), Expect = 2e-13
Identities = 37/81 (45%), Positives = 46/81 (56%)
Frame = +2
Query: 143 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 322
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 323 IETAGGVMTTLIKRNSTIPTK 385
IET GGVMT LI RN+ IPTK
Sbjct: 59 IETVGGVMTKLIGRNTVIPTK 79
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
R FE LN DL ++ P+ +L DA +D A + +IVLVGGST++P V+K++ FF K
Sbjct: 331 RDEFETLNGDLLKAIELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KS 389
Query: 191 LNKSINPD 214
N ++P+
Sbjct: 390 ANYGVDPE 397
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 54.4 bits (125), Expect = 3e-08
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
R F L +D+ EP+E++LR A++ I VL+G TR+PKVQ+++Q KE
Sbjct: 334 REDFNHLISDMESRFGEPIEQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKE 393
Query: 191 LNKSINPDE 217
+ K +N DE
Sbjct: 394 IGKFLNTDE 402
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQ-IHDIVLVGGSTRIPKVQKLLQDFFNGK 187
R FE+L A +F + + D K + I +I +VGGS+RIP ++++++D F GK
Sbjct: 305 RQEFEDLAAPIFNRIKQVLINLFADGVSIKPEEIDEIEIVGGSSRIPMIREIVKDLF-GK 363
Query: 188 ELNKSINPDEXXXXXXXXXXXIL 256
E ++N DE IL
Sbjct: 364 EPKTTMNQDEAVARGAAMQCAIL 386
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
R E++ DL P+ ++ A++ I +VL+G TR+PKV+++L+ KE
Sbjct: 321 REELEKMIEDLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKE 380
Query: 191 LNKSINPDE 217
++ +N DE
Sbjct: 381 ISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 43.6 bits (98), Expect = 6e-05
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 11 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 190
R E++ DL P+ ++ A++ I +VL+G TR+PKV+++L+ KE
Sbjct: 337 REELEKMIEDLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKE 396
Query: 191 LNKSINPDE 217
++ +N DE
Sbjct: 397 ISNFLNTDE 405
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 274 GGARSSAARRDPVVARYRDRGRCYDYAHQAQQHHPHE 384
G + SSAA R V+ R + Y HQ QQ H H+
Sbjct: 684 GQSGSSAAARQRTVSGSAARAQTYQMHHQQQQQHHHQ 720
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 274 GGARSSAARRDPVVARYRDRGRCYDYAHQAQQHH 375
G + SSAA R V+ R + Y HQ QQHH
Sbjct: 678 GQSGSSAAARQRTVSGSAARAQTYQMHHQQQQHH 711
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 271 RLVAVQNCSLYGGSVCDGLVRVDGLVQLL 185
+LVA+ N L GG VC G++ D V L+
Sbjct: 373 QLVAISNRRLRGGMVCRGVICEDDTVLLV 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,195,492
Number of Sequences: 27780
Number of extensions: 160725
Number of successful extensions: 488
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -